RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 PTPRN2Q92932 1015 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 PGAP3Q96FM1 320 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-204ENST00000430682 CFAP57Q96MR6 1250 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
SMPD4-204ENST00000430682 NUSAP1Q9BXS6 441 aaKnown RBP12.9□□□□□ -0.34
SMPD4-204ENST00000430682 METTL5Q9NRN9 209 aaKnown RBP12.9□□□□□ -0.34
SMPD4-204ENST00000430682 CEP83Q9Y592 693 aa12.9□□□□□ -0.34
SMPD4-204ENST00000430682 IGF2RP11717 2491 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 SRPRAP08240 638 aaKnown RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 ACADMP11310 421 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 MMP8P22894 467 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 OXTRP30559 389 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 HOXD12P35452 270 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 PLK1P53350 603 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 DEUP1Q05D60 604 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 C15orf59Q2T9L4 293 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 SLC25A52Q3SY17 297 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 FKBP15Q5T1M5 1219 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 PSAPL1Q6NUJ1 521 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 ZNF677Q86XU0 584 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 STK40Q8N2I9 435 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 ZCCHC9Q8N567 271 aaKnown RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 ZNF557Q8N988 423 aaPredicted RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 CADM4Q8NFZ8 388 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 FRS2Q8WU20 508 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 PSMB7Q99436 277 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 C11orf70Q9BRQ4 267 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 ORAI3Q9BRQ5 295 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 FEM1AQ9BSK4 669 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 GTPBP2Q9BX10 602 aaKnown RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 WDCPQ9H6R7 721 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 MPP6Q9NZW5 540 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 ZNF212Q9UDV6 495 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 SUN2Q9UH99 717 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 SLC12A6Q9UHW9 1150 aa12.89□□□□□ -0.35
SMPD4-204ENST00000430682 EIF2B4Q9UI10 523 aaKnown RBP12.89□□□□□ -0.35
SMPD4-204ENST00000430682 CACNA1BQ00975 2339 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 DRGXA6NNA5 263 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 C10orf142B7Z368 130 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 RNF103O00237 685 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 PLK4O00444 970 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 ARHGAP33O14559 1287 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 MID1O15344 667 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 GJB3O75712 270 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 ENDOD1O94919 500 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 MT-CO1P00395 513 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 CDK11BP21127 795 aaKnown RBP12.88□□□□□ -0.35
SMPD4-204ENST00000430682 STAT1P42224 750 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 SNX16P57768 344 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 FAM193AP78312 1265 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 ATP11AP98196 1134 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 E2F5Q15329 346 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 CCDC14Q49A88 953 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 RNF219Q5W0B1 726 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-204ENST00000430682 ZNF776Q68DI1 518 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-204ENST00000430682 FAM131BQ86XD5 332 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 MMAAQ8IVH4 418 aaKnown RBP12.88□□□□□ -0.35
SMPD4-204ENST00000430682 MINDY1Q8N5J2 469 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 AADATQ8N5Z0 425 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 KDM1BQ8NB78 822 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 DEFB124Q8NES8 71 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 NEK11Q8NG66 645 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 FOXJ1Q92949 421 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 SYT11Q9BT88 431 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 MIR1-1HGQ9H1L0 117 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 PABPC3Q9H361 631 aaKnown RBP12.88□□□□□ -0.35
SMPD4-204ENST00000430682 EBF2Q9HAK2 575 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 RRN3Q9NYV6 651 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 FREM2Q5SZK8 3169 aa12.88□□□□□ -0.35
SMPD4-204ENST00000430682 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
SMPD4-204ENST00000430682 TDRD6O60522 2096 aaKnown RBP12.87□□□□□ -0.35
SMPD4-204ENST00000430682 IGLV3-10A0A075B6K4 115 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 A0A0D9SEW6 157 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 TCRBV5S1A1TA0A578 114 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 TARSL2A2RTX5 802 aaKnown RBP12.87□□□□□ -0.35
SMPD4-204ENST00000430682 MEI4A8MW99 385 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 SNAP91O60641 907 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 SEMA4FO95754 770 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 TOP3BO95985 862 aaKnown RBP12.87□□□□□ -0.35
SMPD4-204ENST00000430682 DNTTP04053 509 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 IGHV4-34P06331 123 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 CD59P13987 128 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 GLDCP23378 1020 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 NOVA1P51513 510 aaKnown RBP12.87□□□□□ -0.35
SMPD4-204ENST00000430682 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 GFPT1Q06210 699 aaPredicted RBP12.87□□□□□ -0.35
SMPD4-204ENST00000430682 GRIK2Q13002 908 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 SEMA3BQ13214 749 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 SLC12A1Q13621 1099 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 IQCB1Q15051 598 aa12.87□□□□□ -0.35
SMPD4-204ENST00000430682 CST6Q15828 149 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms