RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 STK39Q9UEW8 545 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 HBS1LQ9Y450 684 aaKnown RBP14.65□□□□□ -0.06
CALD1-207ENST00000430085 YIPF1Q9Y548 306 aa14.65□□□□□ -0.06
CALD1-207ENST00000430085 WASH4PA8MWX3 477 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 RHOQP17081 205 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 CA8P35219 290 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 GRIA1P42261 906 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 DMTNQ08495 405 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 ZBTB17Q13105 803 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 HECTD3Q5T447 861 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 RAP1GAP2Q684P5 730 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 TIGD7Q6NT04 549 aaPredicted RBP14.64□□□□□ -0.07
CALD1-207ENST00000430085 LRRC8BQ6P9F7 803 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 ZNF276Q8N554 614 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 AUTS2Q8WXX7 1259 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 TSGA13Q96PP4 275 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 ZBED2Q9BTP6 218 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 SLC39A8Q9C0K1 460 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.64□□□□□ -0.07
CALD1-207ENST00000430085 TRPM5Q9NZQ8 1165 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 TCRBV9S1A1TA0A576 114 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 ZNF840PA6NDX5 716 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 ERICH4A6NGS2 130 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 ARHGAP42A6NI28 874 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 RASA4BC9J798 803 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 RASA4O43374 803 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 JCHAINP01591 159 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 FGBP02675 491 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 GSTA2P09210 222 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 KRT15P19012 456 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 MSH2P43246 934 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 CREMQ03060 361 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 PRPSAP1Q14558 356 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 EFTUD2Q15029 972 aaKnown RBP eCLIP14.64□□□□□ -0.07
CALD1-207ENST00000430085 RASA2Q15283 850 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 TMEM240Q5SV17 173 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 ARTNQ5T4W7 220 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 SNX30Q5VWJ9 437 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 LRRC49Q8IUZ0 686 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 SRRM1Q8IYB3 904 aaKnown RBP14.64□□□□□ -0.07
CALD1-207ENST00000430085 FIBCD1Q8N539 461 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 MDM1Q8TC05 714 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 TEKT5Q96M29 485 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 PAFAH2Q99487 392 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 EBNA1BP2Q99848 306 aaKnown RBP14.64□□□□□ -0.07
CALD1-207ENST00000430085 GDF15Q99988 308 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 NDFIP2Q9NV92 336 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 IKBKGQ9Y6K9 419 aa14.64□□□□□ -0.07
CALD1-207ENST00000430085 PTPRSQ13332 1948 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 SDR42E2A6NKP2 422 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 ERI2A8K979 691 aaKnown RBP14.63□□□□□ -0.07
CALD1-207ENST00000430085 CCNB1P14635 433 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 BRAFP15056 766 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 CHN1P15882 459 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 HMGA1P17096 107 aaKnown RBP14.63□□□□□ -0.07
CALD1-207ENST00000430085 PLD1Q13393 1074 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 AFMIDQ63HM1 303 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 CASC4Q6P4E1 433 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 ARHGAP36Q6ZRI8 547 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 TFAP2DQ7Z6R9 452 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 NLRP14Q86W24 1093 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 CHSY1Q86X52 802 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 ZNF683Q8IZ20 524 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 MAML1Q92585 1016 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 STAMBPL1Q96FJ0 436 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 SIGLEC10Q96LC7 697 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 MYRFLQ96LU7 910 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 RPRD1AQ96P16 312 aaPredicted RBP14.63□□□□□ -0.07
CALD1-207ENST00000430085 KCNK9Q9NPC2 374 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 ACTL7BQ9Y614 415 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 SHROOM3Q8TF72 1996 aa14.63□□□□□ -0.07
CALD1-207ENST00000430085 IGLV3-10A0A075B6K4 115 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 TRDMT1O14717 391 aaKnown RBP14.62□□□□□ -0.07
CALD1-207ENST00000430085 MAFKO60675 156 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 NEBLO76041 1014 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 FGF18O76093 207 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 GJB5O95377 273 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 AP2A1O95782 977 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 NFKB1P19838 968 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 HARS2P49590 506 aaKnown RBP14.62□□□□□ -0.07
CALD1-207ENST00000430085 NDST2P52849 883 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 EPHB3P54753 998 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 SESN2P58004 480 aaPredicted RBP14.62□□□□□ -0.07
CALD1-207ENST00000430085 TWF1Q12792 350 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 KBTBD12Q3ZCT8 623 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 C9orf50Q5SZB4 431 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 FBXL22Q6P050 247 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 PSRC1Q6PGN9 363 aaPredicted RBP14.62□□□□□ -0.07
CALD1-207ENST00000430085 KLHDC10Q6PID8 442 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 UMODL1-AS1Q8N2C9 162 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 MPP5Q8N3R9 675 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 USP33Q8TEY7 942 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 TRMT2BQ96GJ1 504 aaKnown RBP14.62□□□□□ -0.07
CALD1-207ENST00000430085 PPANQ9NQ55 473 aaKnown RBP14.62□□□□□ -0.07
CALD1-207ENST00000430085 INTS9Q9NV88 658 aaKnown RBP14.62□□□□□ -0.07
CALD1-207ENST00000430085 TMEM248Q9NWD8 314 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 SENP1Q9P0U3 644 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 MAFFQ9ULX9 164 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 SSX2IPQ9Y2D8 614 aa14.62□□□□□ -0.07
CALD1-207ENST00000430085 NUP205Q92621 2012 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms