RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CAVIN1Q6NZI2 390 aaKnown RBP18.98■□□□□ 0.63
GPC1-205ENST00000427506 LRRC31Q6UY01 552 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 TRIM72Q6ZMU5 477 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 HDDC3Q8N4P3 179 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 ZCCHC9Q8N567 271 aaKnown RBP18.98■□□□□ 0.63
GPC1-205ENST00000427506 SLC30A5Q8TAD4 765 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 DNASE2BQ8WZ79 361 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 NT5C3BQ969T7 300 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 CFAP57Q96MR6 1250 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 METTL5Q9NRN9 209 aaKnown RBP18.98■□□□□ 0.63
GPC1-205ENST00000427506 TMEM59LQ9UK28 342 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 SCML1Q9UN30 329 aa18.98■□□□□ 0.63
GPC1-205ENST00000427506 A0A1B0GTW7 788 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 LRRC10BA6NIK2 292 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 SEMA4FO95754 770 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 PLK1P53350 603 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 CDH4P55283 916 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 ARID5BQ14865 1188 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 C9orf64Q5T6V5 341 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 N4BP2L1Q5TBK1 243 aaPredicted RBP18.97■□□□□ 0.63
GPC1-205ENST00000427506 SH3PXD2AQ5TCZ1 1133 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 PHLDB2Q86SQ0 1253 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 MMAAQ8IVH4 418 aaKnown RBP18.97■□□□□ 0.63
GPC1-205ENST00000427506 MINDY1Q8N5J2 469 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 ERGIC2Q96RQ1 377 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 C11orf70Q9BRQ4 267 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 PCED1AQ9H1Q7 454 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 C6orf106Q9H6K1 298 aaPredicted RBP18.97■□□□□ 0.63
GPC1-205ENST00000427506 ANLNQ9NQW6 1124 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 SEPT11Q9NVA2 429 aaKnown RBP18.97■□□□□ 0.63
GPC1-205ENST00000427506 EIF2B4Q9UI10 523 aaKnown RBP18.97■□□□□ 0.63
GPC1-205ENST00000427506 SLC25A13Q9UJS0 675 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 VPS28Q9UK41 221 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 SNX10Q9Y5X0 201 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 ITIH6Q6UXX5 1313 aa18.97■□□□□ 0.63
GPC1-205ENST00000427506 SMTNL1A8MU46 457 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 OPHN1O60890 802 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 ATP1A3P13637 1013 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 MMP8P22894 467 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 RDXP35241 583 aaKnown RBP18.96■□□□□ 0.63
GPC1-205ENST00000427506 NSFP46459 744 aaKnown RBP18.96■□□□□ 0.63
GPC1-205ENST00000427506 CST6Q15828 149 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 ACCSLQ4AC99 568 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 ACBD5Q5T8D3 534 aaPredicted RBP18.96■□□□□ 0.63
GPC1-205ENST00000427506 EMC1Q8N766 993 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 OMDQ99983 421 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 FEM1AQ9BSK4 669 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 MUC3BQ9H195 1237 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 HSD3B7Q9H2F3 369 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 PABPC3Q9H361 631 aaKnown RBP18.96■□□□□ 0.63
GPC1-205ENST00000427506 SGK2Q9HBY8 427 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 FBXL12Q9NXK8 326 aa18.96■□□□□ 0.63
GPC1-205ENST00000427506 FAM47DPA6NHR8 397 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 MID1O15344 667 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 BCAT2O15382 392 aaPredicted RBP18.95■□□□□ 0.62
GPC1-205ENST00000427506 RNASEH2AO75792 299 aaKnown RBP18.95■□□□□ 0.62
GPC1-205ENST00000427506 CNTN5O94779 1100 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 FSBPO95073 299 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 RHOCP08134 193 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 C7P10643 843 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 CSRP1P21291 193 aaKnown RBP18.95■□□□□ 0.62
GPC1-205ENST00000427506 SLC8A1P32418 973 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 PSMD8P48556 350 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 ATP11AP98196 1134 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 C5orf22Q49AR2 442 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 TRNP1Q6NT89 227 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 USP30Q70CQ3 517 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 ARCQ7LC44 396 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 APTXQ7Z2E3 356 aaKnown RBP18.95■□□□□ 0.62
GPC1-205ENST00000427506 FAM131BQ86XD5 332 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 STK40Q8N2I9 435 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 OR52K2Q8NGK3 314 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 OR2I1PQ8NGU4 316 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 BPIFA3Q9BQP9 254 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 SLC32A1Q9H598 525 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 TMPRSS4Q9NRS4 437 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 ADAM22Q9P0K1 906 aa18.95■□□□□ 0.62
GPC1-205ENST00000427506 A0A1W2PP55 124 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 I6L893 689 aaPredicted RBP18.94■□□□□ 0.62
GPC1-205ENST00000427506 GIPC1O14908 333 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 SRGAP2O75044 1071 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 IL1BP01584 269 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 SDC4P31431 198 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 KRT83P78385 493 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 CDO1Q16878 200 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 ALFQ53S48 1182 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 DEFB124Q8NES8 71 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 RXFP2Q8WXD0 754 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 PTPRN2Q92932 1015 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 ALG14Q96F25 216 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 C1orf74Q96LT6 269 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 HAPLN3Q96S86 360 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 PCDHB18PQ96TA0 734 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 FAM129BQ96TA1 746 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 TBC1D30Q9Y2I9 924 aa18.94■□□□□ 0.62
GPC1-205ENST00000427506 E9PAM4 449 aa18.93■□□□□ 0.62
GPC1-205ENST00000427506 ADH1BP00325 375 aa18.93■□□□□ 0.62
GPC1-205ENST00000427506 CCDC172P0C7W6 258 aa18.93■□□□□ 0.62
GPC1-205ENST00000427506 UNGP13051 313 aaPredicted RBP18.93■□□□□ 0.62
GPC1-205ENST00000427506 CEACAM1P13688 526 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms