RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 DNAJC1Q96KC8 554 aaKnown RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 ZNF778Q96MU6 729 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 COPS7BQ9H9Q2 264 aaPredicted RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 DTLQ9NZJ0 730 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 BFARQ9NZS9 450 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 COMMD10Q9Y6G5 202 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 CASP8AP2Q9UKL3 1982 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 A0A096LPK6 155 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 MBLAC1A4D2B0 266 aaPredicted RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 NEMP2A6NFY4 417 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 SCAMP3O14828 347 aaKnown RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 XPO1O14980 1071 aaKnown RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 BPGMP07738 259 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 ITGA2BP08514 1039 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 CYP2B6P20813 491 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 MPSTP25325 297 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 PAPOLAP51003 745 aaKnown RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 TPI1P60174 286 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 COG7P83436 770 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 PDE1CQ14123 709 aaPredicted RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 LDB1Q86U70 411 aaPredicted RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 SPATA22Q8NHS9 363 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 CDRT15Q96T59 188 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 ZFYVE28Q9HCC9 887 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 CASTOR2A6NHX0 329 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 HMBSP08397 361 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 BEX3Q00994 111 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 MED21Q13503 144 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 PAOXQ6QHF9 649 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 TDRPQ86YL5 185 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 OR6P1Q8NGX9 317 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 CEP70Q8NHQ1 597 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 GDPD5Q8WTR4 605 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 LPPQ93052 612 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
USP42-203ENST00000426246 NDNQ99608 321 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 ADAMTS10Q9H324 1103 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 RALGAPA2Q2PPJ7 1873 aa13.69□□□□□ -0.22
USP42-203ENST00000426246 LMNAP02545 664 aaKnown RBP13.68□□□□□ -0.22
USP42-203ENST00000426246 LTFP02788 710 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 HOXC8P31273 242 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 KCNJ11Q14654 390 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 TRIM42Q8IWZ5 723 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 UBR7Q8N806 425 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 SOCS4Q8WXH5 440 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.68□□□□□ -0.22
USP42-203ENST00000426246 SOX13Q9UN79 622 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 LRCH1Q9Y2L9 728 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 CA12O43570 354 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 GNAZP19086 355 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 HDCP19113 662 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 RGS2P41220 211 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 SKIV2L2P42285 1042 aaKnown RBP13.68□□□□□ -0.22
USP42-203ENST00000426246 SREBF2Q12772 1141 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 EFHC1Q5JVL4 640 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 OTOP3Q7RTS5 596 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 LRRC43Q8N309 656 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 ACVR1CQ8NER5 493 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 APPL2Q8NEU8 664 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 SIN3BO75182 1162 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 GPR32O75388 356 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 OR6B1O95007 311 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 VAPBO95292 243 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 POLBP06746 335 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 GSTA2P09210 222 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 VAV1P15498 845 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 IL4RP24394 825 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 ETFBP38117 255 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 MAPK10P53779 464 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 AQP4P55087 323 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 PITRM1Q5JRX3 1037 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 PACS1Q6VY07 963 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 SCN4BQ8IWT1 228 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 BEST2Q8NFU1 509 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 LRGUKQ96M69 825 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
USP42-203ENST00000426246 RUVBL2Q9Y230 463 aaKnown RBP13.68□□□□□ -0.22
USP42-203ENST00000426246 BEST1O76090 585 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 MT-CYBP00156 380 aaPredicted RBP13.67□□□□□ -0.22
USP42-203ENST00000426246 MYL3P08590 195 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 SMIM10L2AP0DMW4 78 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 SMIM10L2BP0DMW5 78 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 CTC1Q2NKJ3 1217 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 NOMO2Q5JPE7 1267 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 PPP1R2P3Q6NXS1 205 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 OR52B2Q96RD2 323 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 THAP1Q9NVV9 213 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 PCDHGC3Q9UN70 934 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 Q9Y3F1 56 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 SCN10AQ9Y5Y9 1956 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 PDCD11Q14690 1871 aaKnown RBP13.67□□□□□ -0.22
USP42-203ENST00000426246 FAM72CH0Y354 149 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 B4GALT4O60513 344 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 GPC4O75487 556 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 IL18RAPO95256 599 aa13.67□□□□□ -0.22
USP42-203ENST00000426246 CYP2C9P11712 490 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms