RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 ARHGAP20Q9P2F6 1191 aa18.15■□□□□ 0.5
HDAC7-208ENST00000425451 CYTH4Q9UIA0 394 aa18.15■□□□□ 0.5
HDAC7-208ENST00000425451 CNTN6Q9UQ52 1028 aa18.15■□□□□ 0.5
HDAC7-208ENST00000425451 BPTFQ12830 3046 aa18.15■□□□□ 0.5
HDAC7-208ENST00000425451 NYNRINQ9P2P1 1898 aaKnown RBP18.14■□□□□ 0.49
HDAC7-208ENST00000425451 YKT6O15498 198 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 SART1O43290 800 aaKnown RBP18.14■□□□□ 0.49
HDAC7-208ENST00000425451 RFPL3O75679 317 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 MOCS3O95396 460 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 ADH1BP00325 375 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 IGLV3-25P01717 112 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 MZF1P28698 734 aaPredicted RBP18.14■□□□□ 0.49
HDAC7-208ENST00000425451 NUMBP49757 651 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 PITX1P78337 314 aaPredicted RBP18.14■□□□□ 0.49
HDAC7-208ENST00000425451 SFMBT2Q5VUG0 894 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 DENND1BQ6P3S1 775 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 KANSL1Q7Z3B3 1105 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 SPATS2Q86XZ4 545 aaKnown RBP18.14■□□□□ 0.49
HDAC7-208ENST00000425451 EHBP1Q8NDI1 1231 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 STK32AQ8WU08 396 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 FRS2Q8WU20 508 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 SMARCE1Q969G3 411 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 PRMT1Q99873 361 aaKnown RBP18.14■□□□□ 0.49
HDAC7-208ENST00000425451 ERVMER34-1Q9H9K5 563 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 CEP83Q9Y592 693 aa18.14■□□□□ 0.49
HDAC7-208ENST00000425451 HELZ2Q9BYK8 2649 aaKnown RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3DA0A087WVF3 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3IA0A087WXS9 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3EA0A087X179 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3KA0A087X1G2 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3FA6NER0 549 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3LB9A6J9 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 P4HA2O15460 535 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 SMC2O95347 1197 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TRUB2O95900 331 aaKnown RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 IL1BP01584 269 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3HP0C7X1 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 CDK4P11802 303 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 ITPKBP27987 946 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 RXRGP48443 463 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 ARRB1P49407 418 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TARDBPQ13148 414 aaKnown RBP eCLIP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 ELAVL3Q14576 367 aaKnown RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 RNF219Q5W0B1 726 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3GQ6DHY5 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 ISM2Q6H9L7 571 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3CQ6IPX1 549 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 FBXL19Q6PCT2 694 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 CHSY1Q86X52 802 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TBC1D3Q8IZP1 549 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 DHTKD1Q96HY7 919 aaPredicted RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 BTN2A3PQ96KV6 586 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 DCBLD2Q96PD2 775 aa18.13■□□□□ 0.49
HDAC7-208ENST00000425451 TPX2Q9ULW0 747 aaKnown RBP18.13■□□□□ 0.49
HDAC7-208ENST00000425451 PSMA7O14818 248 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 TLX3O43711 291 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-208ENST00000425451 RTN2O75298 545 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 APOEP02649 317 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 HNF1BP35680 557 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 EIF2S3P41091 472 aaKnown RBP18.12■□□□□ 0.49
HDAC7-208ENST00000425451 ACADSBP45954 432 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 PLK1P53350 603 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 YWHAZP63104 245 aaKnown RBP18.12■□□□□ 0.49
HDAC7-208ENST00000425451 SLC12A1Q13621 1099 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 CCDC40Q4G0X9 1142 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 C6orf118Q5T5N4 469 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 NAPEPLDQ6IQ20 393 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 TTI2Q6NXR4 508 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 TMEM110Q86TL2 294 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 CIR1Q86X95 450 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-208ENST00000425451 CCAR2Q8N163 923 aaKnown RBP18.12■□□□□ 0.49
HDAC7-208ENST00000425451 MFSD2AQ8NA29 543 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 NXPE2Q96DL1 559 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 GTPBP4Q9BZE4 634 aaKnown RBP18.12■□□□□ 0.49
HDAC7-208ENST00000425451 POPDC2Q9HBU9 364 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 TJP2Q9UDY2 1190 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 SARDHQ9UL12 918 aa18.12■□□□□ 0.49
HDAC7-208ENST00000425451 ARID1BQ8NFD5 2236 aaPredicted RBP18.12■□□□□ 0.49
HDAC7-208ENST00000425451 KCNU1A8MYU2 1149 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 E5RJQ4 531 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 CAPN9O14815 690 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 PDGFRAP16234 1089 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 BMP6P22004 513 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 ABCG1P45844 678 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 CETN1Q12798 172 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 TAF5Q15542 800 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 MEA1Q16626 185 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 SLC45A4Q5BKX6 768 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 HES3Q5TGS1 186 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 CXorf57Q6NSI4 855 aaKnown RBP18.11■□□□□ 0.49
HDAC7-208ENST00000425451 PIP4K2CQ8TBX8 421 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 ALG14Q96F25 216 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 SPAG5Q96R06 1193 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 TRIM62Q9BVG3 475 aa18.11■□□□□ 0.49
HDAC7-208ENST00000425451 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.11■□□□□ 0.49
HDAC7-208ENST00000425451 F5H5T6 163 aa18.1■□□□□ 0.49
HDAC7-208ENST00000425451 MAT2AP31153 395 aaKnown RBP18.1■□□□□ 0.49
HDAC7-208ENST00000425451 NNMTP40261 264 aa18.1■□□□□ 0.49
HDAC7-208ENST00000425451 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms