RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 TRIT1Q9H3H1 467 aaKnown RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 PDFQ9HBH1 243 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 TUFT1Q9NNX1 390 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SCHIP1Q9P0W5 487 aaPredicted RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SUCLA2Q9P2R7 463 aaPredicted RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 PLAAQ9Y263 795 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 PRAMEF33A0A0G2JMD5 474 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 TCRBV5S1A1TA0A578 114 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 FAM149AA5PLN7 773 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SMARCA5O60264 1052 aaPredicted RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 PRAMEF10O60809 474 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 DNAJC6O75061 913 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 CNOT3O75175 753 aaKnown RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 WISP2O76076 250 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 BEST1O76090 585 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 IFNAR1P17181 557 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 DGKAP23743 735 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 CDC25CP30307 473 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 NOS2P35228 1153 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 CYP4F8P98187 520 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 NNTQ13423 1086 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SYCP2LQ5T4T6 812 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 UBAP2Q5T6F2 1119 aaKnown RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 NT5DC4Q86YG4 428 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SCUBE1Q8IWY4 988 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 RNF169Q8NCN4 708 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 ST13P5Q8NFI4 369 aaPredicted RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 ASB11Q8WXH4 323 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 LRFN5Q96NI6 719 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 ZSWIM1Q9BR11 485 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 MESP1Q9BRJ9 268 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 ANLNQ9NQW6 1124 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SPHK2Q9NRA0 654 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 KLHL11Q9NVR0 708 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SCML1Q9UN30 329 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 L1RE1Q9UN81 338 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 PCDHGB6Q9Y5F9 930 aa1.94□□□□□ -2.1
UBE2W-202ENST00000422906 FASNP49327 2511 aaKnown RBP1.94□□□□□ -2.1
UBE2W-202ENST00000422906 SPTY2D1-AS1A0A0U1RR47 76 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 MPHOSPH10O00566 681 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 N4BP3O15049 544 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PMM2O15305 246 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SIGLEC6O43699 453 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CSDE1O75534 798 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 GCATO75600 419 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 KAT7O95251 611 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 VNN1O95497 513 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 RBP3P10745 1247 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 FGF3P11487 239 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CD19P15391 556 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 AKAP5P24588 427 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 HLA-FP30511 346 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 NTSR1P30989 418 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ACSL1P33121 698 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TRIM23P36406 574 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ATXN3P54252 364 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 GSCP56915 257 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 MC2RQ01718 297 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 OVGP1Q12889 678 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 LPAL2Q16609 132 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 MEA1Q16626 185 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ATP13A4Q4VNC1 1196 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 HSP90AB4PQ58FF6 505 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 VAX1Q5SQQ9 334 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 AHI1Q8N157 1196 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 LRRC52Q8N7C0 313 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 HCAR2Q8TDS4 363 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 KLHL6Q8WZ60 621 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ZNF592Q92610 1267 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 DNAJC19Q96DA6 116 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TMEM169Q96HH4 297 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 RBM15Q96T37 977 aaKnown RBP eCLIP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 RNF26Q9BY78 433 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 GCOM2Q9BZD3 368 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 BRD8Q9H0E9 1235 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 C17orf75Q9HAS0 396 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CYP4F12Q9HCS2 524 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 SH2D2AQ9NP31 389 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 FBXO8Q9NRD0 319 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 BLOC1S4Q9NUP1 217 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 NUMA1Q14980 2115 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 HMCN1Q96RW7 5635 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 FAM157AC9JC47 383 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 AREL1O15033 823 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 BCAT2O15382 392 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TULP3O75386 442 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PMPCBO75439 489 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CD2BP2O95400 341 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 TDP2O95551 362 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 FSHBP01225 129 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CD1CP29017 333 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 YWHABP31946 246 aaKnown RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 ADAM8P78325 824 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PPP2R2BQ00005 443 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 CCDC173Q0VFZ6 552 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 PRR30Q53SZ7 412 aaPredicted RBP1.93□□□□□ -2.1
UBE2W-202ENST00000422906 EOGTQ5NDL2 527 aa1.93□□□□□ -2.1
UBE2W-202ENST00000422906 GORABQ5T7V8 394 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms