RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 CAMK2GQ13555 558 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-211ENST00000420363 ARID5BQ14865 1188 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 CDO1Q16878 200 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 TDRD12Q587J7 1177 aaKnown RBP22.01■■□□□ 1.11
CPNE1-211ENST00000420363 PHLDB2Q86SQ0 1253 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 C14orf80Q86SX3 495 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 VPS36Q86VN1 386 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 FAM172AQ8WUF8 416 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 TRIM11Q96F44 468 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 MCEEQ96PE7 176 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 INVSQ9Y283 1065 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 TBC1D30Q9Y2I9 924 aa22.01■■□□□ 1.11
CPNE1-211ENST00000420363 DRGXA6NNA5 263 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 RTN2O75298 545 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 KRT37O76014 449 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 SERPING1P05155 500 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 SRPRAP08240 638 aaKnown RBP22■■□□□ 1.11
CPNE1-211ENST00000420363 DESP17661 470 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 IRAK1P51617 712 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 HDAC4P56524 1084 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 ST8SIA6P61647 398 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 SCAPQ12770 1279 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 SPDYCQ5MJ68 293 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 N4BP2L1Q5TBK1 243 aaPredicted RBP22■■□□□ 1.11
CPNE1-211ENST00000420363 PLEKHA7Q6IQ23 1121 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 MYO19Q96H55 970 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 PARVAQ9NVD7 372 aa22■■□□□ 1.11
CPNE1-211ENST00000420363 TNRC6BQ9UPQ9 1833 aaKnown RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 E9PAM4 449 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 MYBL1P10243 752 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 SKILP12757 684 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 HNRNPH3P31942 346 aaKnown RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 VASPP50552 380 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 COPAP53621 1224 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 RPL7AP62424 266 aaKnown RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 ZNF177Q13360 481 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 ST3GAL2Q16842 350 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 SPECC1LQ69YQ0 1117 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 TCEAL6Q6IPX3 200 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 DCUN1D2Q6PH85 259 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 SETD3Q86TU7 594 aaPredicted RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 RNF214Q8ND24 703 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 OR2T3Q8NH03 318 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 TCEAL3Q969E4 200 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 MRGPRX3Q96LB0 322 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 CNPY3Q9BT09 278 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 MKRN2Q9H000 416 aaKnown RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 ISCUQ9H1K1 167 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 OSBPL2Q9H1P3 480 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 RETREG1Q9H6L5 497 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 PPARGC1AQ9UBK2 798 aaKnown RBP21.99■■□□□ 1.11
CPNE1-211ENST00000420363 SUN2Q9UH99 717 aa21.99■■□□□ 1.11
CPNE1-211ENST00000420363 THADAQ6YHU6 1953 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 BCLAF3A2AJT9 711 aaKnown RBP21.98■■□□□ 1.11
CPNE1-211ENST00000420363 TMCO5BA8MYB1 307 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 CCP110O43303 1012 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 HLA-EP13747 358 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 BCKDHBP21953 392 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 CASP14P31944 242 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 ADRA1BP35368 520 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 AIF1P55008 147 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 ECT2LQ008S8 904 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 MAMLD1Q13495 774 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 ARTNQ5T4W7 220 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 SH3PXD2AQ5TCZ1 1133 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 MANEALQ5VSG8 457 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 SLC36A4Q6YBV0 504 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 FNIP1Q8TF40 1166 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 ALG14Q96F25 216 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 PRDM16Q9HAZ2 1276 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 TMPRSS4Q9NRS4 437 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 USP36Q9P275 1121 aaKnown RBP21.98■■□□□ 1.11
CPNE1-211ENST00000420363 ANGPTL2Q9UKU9 493 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 ERVW-1Q9UQF0 538 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 SCINQ9Y6U3 715 aa21.98■■□□□ 1.11
CPNE1-211ENST00000420363 CHD8Q9HCK8 2581 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 CNTN5O94779 1100 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 FTLP02792 175 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-211ENST00000420363 MZF1P28698 734 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-211ENST00000420363 HNRNPA1L2Q32P51 320 aaKnown RBP21.97■■□□□ 1.11
CPNE1-211ENST00000420363 RAB6CQ53S08 254 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 ALFQ53S48 1182 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 RNF219Q5W0B1 726 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-211ENST00000420363 KIAA1324Q6UXG2 1013 aaKnown RBP21.97■■□□□ 1.11
CPNE1-211ENST00000420363 ZNF783Q6ZMS7 281 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 TMPRSS6Q8IU80 811 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 VSTM4Q8IW00 320 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 DRC7Q8IY82 874 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 APCDD1Q8J025 514 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 RLN3Q8WXF3 142 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 FEM1AQ9BSK4 669 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 EDEM2Q9BV94 578 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 ZYG11BQ9C0D3 744 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 RAB6CQ9H0N0 254 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 ZNF212Q9UDV6 495 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 MBD1Q9UIS9 605 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-211ENST00000420363 OR51B4Q9Y5P0 310 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 NUP205Q92621 2012 aa21.97■■□□□ 1.11
CPNE1-211ENST00000420363 ABCA7Q8IZY2 2146 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms