RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ZNF131P52739 623 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ACLYP53396 1101 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 SOX10P56693 466 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 RAP2BP61225 183 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 FOXL1Q12952 345 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 STK4Q13043 487 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 MAPK7Q13164 816 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 POLD3Q15054 466 aaPredicted RBP6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 BRD3Q15059 726 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 STX1AQ16623 288 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 KRTAP19-4Q3LI73 84 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 KHDC1LQ5JSQ8 128 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 MARCH8Q5T0T0 291 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ZNF658Q5TYW1 1059 aaPredicted RBP6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ISM2Q6H9L7 571 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 TCTN3Q6NUS6 607 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 MTHFD1LQ6UB35 978 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 PPP1R3BQ86XI6 285 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 SFR1Q86XK3 245 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 FUKQ8N0W3 1084 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 DAW1Q8N136 415 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 MYCT1Q8N699 235 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 TCP11Q8WWU5 503 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 KIFAP3Q92845 792 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 TMEM143Q96AN5 459 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 JPH2Q9BR39 696 aaPredicted RBP6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 NDC1Q9BTX1 674 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 FUCA2Q9BTY2 467 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 C1orf43Q9BWL3 253 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 POLR3FQ9H1D9 316 aaPredicted RBP6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ADAM7Q9H2U9 754 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ZHX3Q9H4I2 956 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 C17orf75Q9HAS0 396 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 PARVGQ9HBI0 331 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 PARD6AQ9NPB6 346 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 SETD4Q9NVD3 440 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ANO10Q9NW15 660 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 HDAC6Q9UBN7 1215 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 SEL1LQ9UBV2 794 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 OGDHLQ9ULD0 1010 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 ZFR2Q9UPR6 939 aaKnown RBP6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 SH3BP1Q9Y3L3 701 aa6.36□□□□□ -1.39
NIFKP3-201ENST00000417799 C17orf102A2RUQ5 167 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 MBLAC1A4D2B0 266 aaPredicted RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 DNM1LO00429 736 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 ASAP2O43150 1006 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 POMCP01189 267 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 TFRCP02786 760 aaKnown RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 AMHP03971 560 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 GJB1P08034 283 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 TMOD1P28289 359 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 HOXC8P31273 242 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 NPTX2P47972 431 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 PIK3CGP48736 1102 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 ADAM17P78536 824 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 ELAVL1Q15717 326 aaKnown RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 DPCR1Q3MIW9 517 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 ATXN7L2Q5T6C5 722 aaPredicted RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 EFCAB12Q6NXP0 572 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 NFRKBQ6P4R8 1299 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 GLB1LQ6UWU2 654 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 GPRIN1Q7Z2K8 1008 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 SESTD1Q86VW0 696 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 CIR1Q86X95 450 aaPredicted RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 D2HGDHQ8N465 521 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 LRRC71Q8N4P6 559 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 METTL13Q8N6R0 699 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 LINC01465Q8N7H1 131 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 MLKLQ8NB16 471 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 SLC17A8Q8NDX2 589 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 NLGN4YQ8NFZ3 816 aaPredicted RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 ZFP28Q8NHY6 868 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 U2AF1L4Q8WU68 220 aaKnown RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 PRPF31Q8WWY3 499 aaKnown RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 ST8SIA2Q92186 375 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 TFAP2CQ92754 450 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 IFT74Q96LB3 600 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 GLT1D1Q96MS3 346 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 NTPCRQ9BSD7 190 aaKnown RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 APOL5Q9BWW9 433 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 PACSIN1Q9BY11 444 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 SEZ6LQ9BYH1 1024 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 TSPY26PQ9H489 355 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 OLFML3Q9NRN5 406 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 TBC1D7Q9P0N9 293 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 LARSQ9P2J5 1176 aaKnown RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 SUCLA2Q9P2R7 463 aaPredicted RBP6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 SLC30A1Q9Y6M5 507 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 WDR81Q562E7 1941 aa6.35□□□□□ -1.39
NIFKP3-201ENST00000417799 PCNTO95613 3336 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 GRIN2DO15399 1336 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 SMIM35A0A1B0GVV1 85 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 CCDC169A6NNP5 214 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 H0YCG3 227 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 SLC16A4O15374 487 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 GPR42O15529 346 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 FRS3O43559 492 aa6.34□□□□□ -1.39
NIFKP3-201ENST00000417799 FOXS1O43638 330 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms