RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 NAPEPLDQ6IQ20 393 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 TAC4Q86UU9 113 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 SPATA20Q8TB22 786 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 BAP1Q92560 729 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 CEP63Q96MT8 703 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 UBL7Q96S82 380 aaPredicted RBP16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 ORAI3Q9BRQ5 295 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 FAM204AQ9H8W3 233 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 POPDC2Q9HBU9 364 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 SLCO3A1Q9UIG8 710 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 ITIH6Q6UXX5 1313 aa16.08■□□□□ 0.16
SBDSP1-201ENST00000415772 SYNJ2BP-COX16A0A087WUM0 186 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 C1QTNF3-AMACRE9PGA6 284 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 CBX4O00257 560 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 P4HA2O15460 535 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 WNT1P04628 370 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 PDGFRAP16234 1089 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 MZF1P28698 734 aaPredicted RBP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 MAT2AP31153 395 aaKnown RBP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 NUMBP49757 651 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 PMS1P54277 932 aaKnown RBP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 ZC3H12AQ5D1E8 599 aaKnown RBP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 HES3Q5TGS1 186 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 TTC39BQ5VTQ0 682 aaPredicted RBP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 KLHL10Q6JEL2 608 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 APCDD1Q8J025 514 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 AADATQ8N5Z0 425 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 SAP25Q8TEE9 199 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 OR8D1Q8WZ84 308 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 SPAG5Q96R06 1193 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 MED15Q96RN5 788 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 COX16Q9P0S2 106 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 NBEAQ8NFP9 2946 aa16.07■□□□□ 0.16
SBDSP1-201ENST00000415772 ITPR1Q14643 2758 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 COL5A1P20908 1838 aaPredicted RBP16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 BNIP3LO60238 219 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 CALCAP01258 141 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 SLC2A3P11169 496 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 NUDT1P36639 197 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 STK19P49842 368 aaPredicted RBP16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 NXPH1P58417 271 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 YWHAZP63104 245 aaKnown RBP16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 GCNT1Q02742 428 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 TARDBPQ13148 414 aaKnown RBP eCLIP16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 ISM2Q6H9L7 571 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 MFSD2AQ8NA29 543 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 PTPRN2Q92932 1015 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 KAT5Q92993 513 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 MYEOVQ96EZ4 313 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 SLC39A13Q96H72 371 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 LMLNQ96KR4 655 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 FAM129BQ96TA1 746 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 KDM4CQ9H3R0 1056 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 EBF2Q9HAK2 575 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 DMTF1Q9Y222 760 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 FARP1Q9Y4F1 1045 aaPredicted RBP16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 ZFYVE26Q68DK2 2539 aa16.06■□□□□ 0.16
SBDSP1-201ENST00000415772 A0A1B0GVM2 712 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 A0A1W2PR77 199 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 BICDL2A1A5D9 508 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 TCAF2A6NFQ2 919 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 KCNU1A8MYU2 1149 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 THAP12O43422 761 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 GABBR2O75899 941 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 LETM1O95202 739 aaPredicted RBP16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 TRUB2O95900 331 aaKnown RBP16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 ACADVLP49748 655 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 CLDN6P56747 220 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 UBE2HP62256 183 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 DAB2P98082 770 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 CDK17Q00537 523 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 C19orf57Q0VDD7 668 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 BNIP3Q12983 259 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 ILKQ13418 452 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 KCNJ12Q14500 433 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 SETMARQ53H47 684 aaPredicted RBP16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 SYPL2Q5VXT5 272 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 ARHGEF19Q8IW93 802 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 EHBP1Q8NDI1 1231 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 ERCC4Q92889 916 aaPredicted RBP16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 CCDC114Q96M63 670 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 RPRD1AQ96P16 312 aaPredicted RBP16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 ERVMER34-1Q9H9K5 563 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 ANKRD11Q6UB99 2663 aaPredicted RBP16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 FREM2Q5SZK8 3169 aa16.05■□□□□ 0.16
SBDSP1-201ENST00000415772 TP53BP1Q12888 1972 aaPredicted RBP16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 PMM2O15305 246 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 SLC7A4O43246 635 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 RTN2O75298 545 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 FYNP06241 537 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 CKMT2P17540 419 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 CCR1P32246 355 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 USP8P40818 1118 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 GPD2P43304 727 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 PPP2CBP62714 309 aa16.04■□□□□ 0.16
SBDSP1-201ENST00000415772 PPP2CAP67775 309 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms