RNA–Protein interactions for RNA: ENST00000411840.6

MRPL48-204, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 1 (best) BASIC

Gene MRPL48, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-204ENST00000411840 SPATA20Q8TB22 786 aa9.41□□□□□ -0.9
MRPL48-204ENST00000411840 ERCC4Q92889 916 aaPredicted RBP9.41□□□□□ -0.9
MRPL48-204ENST00000411840 PTPRN2Q92932 1015 aa9.41□□□□□ -0.9
MRPL48-204ENST00000411840 SERAC1Q96JX3 654 aa9.41□□□□□ -0.9
MRPL48-204ENST00000411840 CNDP2Q96KP4 475 aaKnown RBP9.41□□□□□ -0.9
MRPL48-204ENST00000411840 RPL10LQ96L21 214 aaKnown RBP9.41□□□□□ -0.9
MRPL48-204ENST00000411840 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
MRPL48-204ENST00000411840 GDF3Q9NR23 364 aa9.41□□□□□ -0.9
MRPL48-204ENST00000411840 ST7Q9NRC1 585 aa9.41□□□□□ -0.9
MRPL48-204ENST00000411840 XPO7Q9UIA9 1087 aaKnown RBP9.41□□□□□ -0.9
MRPL48-204ENST00000411840 PCDHGA1Q9Y5H4 931 aa9.41□□□□□ -0.9
MRPL48-204ENST00000411840 CACNA1EQ15878 2313 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 CAPN9O14815 690 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 SART1O43290 800 aaKnown RBP9.4□□□□□ -0.9
MRPL48-204ENST00000411840 LATO43561 262 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 ADH1BP00325 375 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 APOEP02649 317 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 TACR2P21452 398 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 NNMTP40261 264 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 ARRB1P49407 418 aaPredicted RBP9.4□□□□□ -0.9
MRPL48-204ENST00000411840 STK19P49842 368 aaPredicted RBP9.4□□□□□ -0.9
MRPL48-204ENST00000411840 ADPRHP54922 357 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 CLDN6P56747 220 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 NXPH1P58417 271 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 YWHAZP63104 245 aaKnown RBP9.4□□□□□ -0.9
MRPL48-204ENST00000411840 GCNT1Q02742 428 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 BNIP3Q12983 259 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 TARDBPQ13148 414 aaKnown RBP eCLIP9.4□□□□□ -0.9
MRPL48-204ENST00000411840 SLC12A1Q13621 1099 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 CCDC40Q4G0X9 1142 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 SLC45A4Q5BKX6 768 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 ISM2Q6H9L7 571 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 DENND1BQ6P3S1 775 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.4□□□□□ -0.9
MRPL48-204ENST00000411840 TAC4Q86UU9 113 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 ARHGEF19Q8IW93 802 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 STK32AQ8WU08 396 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 TSC1Q92574 1164 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 SMARCE1Q969G3 411 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 FAM149B1Q96BN6 582 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 CRELD1Q96HD1 420 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 DHTKD1Q96HY7 919 aaPredicted RBP9.4□□□□□ -0.9
MRPL48-204ENST00000411840 BTN2A3PQ96KV6 586 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 CEP63Q96MT8 703 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 ERVMER34-1Q9H9K5 563 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 TJP2Q9UDY2 1190 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 CEP192Q8TEP8 1941 aa9.4□□□□□ -0.9
MRPL48-204ENST00000411840 MUC22E2RYF6 1773 aaPredicted RBP9.4□□□□□ -0.91
MRPL48-204ENST00000411840 SETXQ7Z333 2677 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 GOLGA6L4A6NEF3 574 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 EIF4E1BA6NMX2 242 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 KCNU1A8MYU2 1149 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 PSMA7O14818 248 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 P4HA2O15460 535 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 YKT6O15498 198 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 RFPL3O75679 317 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 VAV1P15498 845 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 MZF1P28698 734 aaPredicted RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 EPHA8P29322 1005 aaPredicted RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 HNF1BP35680 557 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 ACADSBP45954 432 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 RXRGP48443 463 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 NUMBP49757 651 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 SEMG2Q02383 582 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 STIM1Q13586 685 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 ELAVL3Q14576 367 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 TAF5Q15542 800 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 TMEM110Q86TL2 294 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 PRPF39Q86UA1 669 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 CHSY1Q86X52 802 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 SPATS2Q86XZ4 545 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 MFSD2AQ8NA29 543 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 FRS2Q8WU20 508 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 KREMEN1Q96MU8 473 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 MED15Q96RN5 788 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 PRMT1Q99873 361 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 TRIM62Q9BVG3 475 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 SLC4A5Q9BY07 1137 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 POPDC2Q9HBU9 364 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 ARHGAP20Q9P2F6 1191 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 SLC12A6Q9UHW9 1150 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 HOOK1Q9UJC3 728 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 TPX2Q9ULW0 747 aaKnown RBP9.39□□□□□ -0.91
MRPL48-204ENST00000411840 CNTN6Q9UQ52 1028 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 AK5Q9Y6K8 562 aa9.39□□□□□ -0.91
MRPL48-204ENST00000411840 BPTFQ12830 3046 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 CFAP46Q8IYW2 2715 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 E5RJQ4 531 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 F5H5T6 163 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 MED7O43513 233 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 RTN2O75298 545 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 TRUB2O95900 331 aaKnown RBP9.38□□□□□ -0.91
MRPL48-204ENST00000411840 IGLV3-25P01717 112 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 KRT5P13647 590 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 PDGFRAP16234 1089 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 CKMT2P17540 419 aa9.38□□□□□ -0.91
MRPL48-204ENST00000411840 ITPKBP27987 946 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms