RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 TTC39BQ5VTQ0 682 aaPredicted RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 TXNRD3NBQ6F5E7 133 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 NETO2Q8NC67 525 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 ALG14Q96F25 216 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 MRGPRX3Q96LB0 322 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 ZYG11BQ9C0D3 744 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 OSBPL2Q9H1P3 480 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 DHX35Q9H5Z1 703 aaKnown RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 ZWILCHQ9H900 591 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 CD248Q9HCU0 757 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 VPS28Q9UK41 221 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 ERVW-1Q9UQF0 538 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 IGLV3-10A0A075B6K4 115 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 RNF8O76064 485 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 H2AFZP0C0S5 128 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 VAV1P15498 845 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 NDUFV2P19404 249 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 IL1R2P27930 398 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 PLA2G5P39877 138 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 SSR1P43307 286 aaKnown RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 MTA1Q13330 715 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 SMTNL2Q2TAL5 461 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 HSF5Q4G112 596 aaPredicted RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 H2AFVQ71UI9 128 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 WDR5BQ86VZ2 330 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 NTAN1Q96AB6 310 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 MYO19Q96H55 970 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 SPON2Q9BUD6 331 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 SNRNP25Q9BV90 132 aaKnown RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 MKRN2Q9H000 416 aaKnown RBP12.31□□□□□ -0.44
NEDD1-202ENST00000411739 ACTL7AQ9Y615 435 aa12.31□□□□□ -0.44
NEDD1-202ENST00000411739 SOWAHDA6NJG2 315 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 SYNCRIPO60506 623 aaKnown RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 LILRB5O75023 590 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 MOCS3O95396 460 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 ECT2LQ008S8 904 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 SIM2Q14190 667 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 MANEALQ5VSG8 457 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 ZC3H14Q6PJT7 736 aaKnown RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 KIAA1324Q6UXG2 1013 aaKnown RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 LINGO4Q6UY18 593 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 CYP4V2Q6ZWL3 525 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 CEP68Q76N32 757 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 DEFB119Q8N690 84 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 ZNF564Q8TBZ8 553 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 CTNNBL1Q8WYA6 563 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 NKD2Q969F2 451 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 ANP32EQ9BTT0 268 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 TMEM245Q9H330 911 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 ZNF212Q9UDV6 495 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 AP4E1Q9UPM8 1137 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 NEU3Q9UQ49 428 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 TBC1D30Q9Y2I9 924 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 OR51B4Q9Y5P0 310 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 RPP40O75818 363 aaKnown RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 MT-CO1P00395 513 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 EPHB2P29323 1055 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 HOXA6P31267 233 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 GJC1P36383 396 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 ENPP2Q13822 863 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 LEKR1Q6ZMV7 388 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 RASSF3Q86WH2 238 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 HSPH1Q92598 858 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 KCTD15Q96SI1 283 aaPredicted RBP12.3□□□□□ -0.44
NEDD1-202ENST00000411739 PSMB7Q99436 277 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 EBF1Q9UH73 591 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 USP18Q9UMW8 372 aa12.3□□□□□ -0.44
NEDD1-202ENST00000411739 FRYLO94915 3013 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 K7ERQ8 282 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 BNIP3LO60238 219 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 DESP17661 470 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 BCKDHBP21953 392 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 ACVRL1P37023 503 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 ST8SIA6P61647 398 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 SCAPQ12770 1279 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 STARD3Q14849 445 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 ERMARDQ5T6L9 678 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 KBTBD6Q86V97 674 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 DCLK2Q8N568 766 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
NEDD1-202ENST00000411739 FNIP1Q8TF40 1166 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 MRGPRX1Q96LB2 322 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 ABCA7Q8IZY2 2146 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 EML5Q05BV3 1969 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 MYO1FO00160 1098 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 SIN3BO75182 1162 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 MRE11P49959 708 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 ACCSLQ4AC99 568 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 ATP13A4Q4VNC1 1196 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 NLRP14Q86W24 1093 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 TMPRSS6Q8IU80 811 aa12.29□□□□□ -0.44
NEDD1-202ENST00000411739 SUMF1Q8NBK3 374 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms