RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 SLCO1B1Q9Y6L6 691 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 ADAMTS9Q9P2N4 1935 aa19.63■□□□□ 0.73
SF3A1-202ENST00000411423 NYNRINQ9P2P1 1898 aaKnown RBP19.62■□□□□ 0.73
SF3A1-202ENST00000411423 GON4LQ3T8J9 2241 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 DRGXA6NNA5 263 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 F9P00740 461 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 SRPRAP08240 638 aaKnown RBP19.62■□□□□ 0.73
SF3A1-202ENST00000411423 ACADMP11310 421 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 RDXP35241 583 aaKnown RBP19.62■□□□□ 0.73
SF3A1-202ENST00000411423 GSCP56915 257 aaPredicted RBP19.62■□□□□ 0.73
SF3A1-202ENST00000411423 ARID5BQ14865 1188 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 NUMA1Q14980 2115 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 LUZP1Q86V48 1076 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 DNAAF5Q86Y56 855 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 PHF13Q86YI8 300 aaPredicted RBP19.62■□□□□ 0.73
SF3A1-202ENST00000411423 CCDC117Q8IWD4 279 aaPredicted RBP19.62■□□□□ 0.73
SF3A1-202ENST00000411423 KDM1BQ8NB78 822 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 PTPRN2Q92932 1015 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 FAM129BQ96TA1 746 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 PSMB7Q99436 277 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 FEM1AQ9BSK4 669 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 RSPH9Q9H1X1 276 aaPredicted RBP19.62■□□□□ 0.73
SF3A1-202ENST00000411423 CAPN10Q9HC96 672 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 MPP6Q9NZW5 540 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 ADAM22Q9P0K1 906 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 ZNF212Q9UDV6 495 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 TBC1D30Q9Y2I9 924 aa19.62■□□□□ 0.73
SF3A1-202ENST00000411423 IGLV3-10A0A075B6K4 115 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 LRRC53A6NM62 1247 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 MOCS3O95396 460 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 ENGP17813 658 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 RFC1P35251 1148 aaPredicted RBP19.61■□□□□ 0.73
SF3A1-202ENST00000411423 CDH4P55283 916 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 ST8SIA6P61647 398 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 SLC12A1Q13621 1099 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 CDO1Q16878 200 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 DCAF12L1Q5VU92 463 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 OR2I1PQ8NGU4 316 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 FRS2Q8WU20 508 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 TTYH3Q9C0H2 523 aa19.61■□□□□ 0.73
SF3A1-202ENST00000411423 C6orf106Q9H6K1 298 aaPredicted RBP19.61■□□□□ 0.73
SF3A1-202ENST00000411423 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 METTL12A8MUP2 240 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 E9PAM4 449 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 CLDN11O75508 207 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 CFIP05156 583 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 OXTRP30559 389 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 NSFP46459 744 aaKnown RBP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 METAP1P53582 386 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 HDAC4P56524 1084 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 ZNF177Q13360 481 aaPredicted RBP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 NR1I3Q14994 352 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 DUOXA1Q1HG43 343 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 PPM1JQ5JR12 505 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 RNF219Q5W0B1 726 aaPredicted RBP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 ZNF776Q68DI1 518 aaPredicted RBP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 SND1Q7KZF4 910 aaKnown RBP eCLIP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 TFAP2DQ7Z6R9 452 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 STK40Q8N2I9 435 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 DNASE2BQ8WZ79 361 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 CENPIQ92674 756 aaPredicted RBP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 C1orf74Q96LT6 269 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 NUP58Q9BVL2 599 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 SEPT11Q9NVA2 429 aaKnown RBP19.6■□□□□ 0.73
SF3A1-202ENST00000411423 NEU3Q9UQ49 428 aa19.6■□□□□ 0.73
SF3A1-202ENST00000411423 A0A0D9SEW6 157 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 FAM72CH0Y354 149 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 MID1O15344 667 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 SNAP91O60641 907 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 FERP16591 822 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 HOXD12P35452 270 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 MAPK8P45983 427 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 MTA1Q13330 715 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 PPP1R15BQ5SWA1 713 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 FAM72AQ5TYM5 149 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 IL31Q6EBC2 164 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 FAM72DQ6L9T8 149 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 WDR59Q6PJI9 974 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 FAM72BQ86X60 149 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 MMAAQ8IVH4 418 aaKnown RBP19.59■□□□□ 0.73
SF3A1-202ENST00000411423 RGL4Q8IZJ4 473 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 CCDC185Q8N715 623 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 CADM4Q8NFZ8 388 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 C1orf216Q8TAB5 229 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 HAPLN3Q96S86 360 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 NUSAP1Q9BXS6 441 aaKnown RBP19.59■□□□□ 0.73
SF3A1-202ENST00000411423 PABPC3Q9H361 631 aaKnown RBP19.59■□□□□ 0.73
SF3A1-202ENST00000411423 FBRSQ9HAH7 460 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 SLC6A14Q9UN76 642 aa19.59■□□□□ 0.73
SF3A1-202ENST00000411423 EDDM13A0A1B0GTR0 161 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 A0A1W2PQC6 194 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 TARSL2A2RTX5 802 aaKnown RBP19.58■□□□□ 0.72
SF3A1-202ENST00000411423 SRGAP2O75044 1071 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 MT-CO1P00395 513 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 DNTTP04053 509 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 SERPINF2P08697 491 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 KRT3P12035 628 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 GLDCP23378 1020 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 SDC4P31431 198 aa19.58■□□□□ 0.72
SF3A1-202ENST00000411423 PTPN9P43378 593 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms