RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ICE2Q659A1 982 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 JADE1Q6IE81 842 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 VSTM1Q6UX27 236 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 PIK3AP1Q6ZUJ8 805 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 PRPF39Q86UA1 669 aaKnown RBP7.31□□□□□ -1.24
UBE2F-204ENST00000409953 OR14C36Q8NHC7 312 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 CYB5D2Q8WUJ1 264 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 PTPRN2Q92932 1015 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 TMEM159Q96B96 161 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 HVCN1Q96D96 273 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 CEP295NLQ96MC4 621 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 KCTD15Q96SI1 283 aaPredicted RBP7.31□□□□□ -1.24
UBE2F-204ENST00000409953 CMKLR1Q99788 373 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 CALN1Q9BXU9 219 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 CCSER1Q9C0I3 900 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 B3GNT4Q9C0J1 378 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 NACA2Q9H009 215 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 RSPH9Q9H1X1 276 aaPredicted RBP7.31□□□□□ -1.24
UBE2F-204ENST00000409953 VPS54Q9P1Q0 977 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 ARHGAP20Q9P2F6 1191 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 COPG2Q9UBF2 871 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 SALL4Q9UJQ4 1053 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 LSM7Q9UK45 103 aaKnown RBP7.31□□□□□ -1.24
UBE2F-204ENST00000409953 TLK1Q9UKI8 766 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 PCDHA5Q9Y5H7 936 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 POLEQ07864 2286 aa7.31□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3DA0A087WVF3 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3IA0A087WXS9 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3EA0A087X179 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3KA0A087X1G2 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3FA6NER0 549 aaPredicted RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 CCDC169A6NNP5 214 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 GOLGA8AA7E2F4 631 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 GOLGA8BA8MQT2 603 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3LB9A6J9 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 LRRTM2O43300 516 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 HCRTO43612 131 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 KRT86O43790 486 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 RRP9O43818 475 aaKnown RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 PPP6R2O75170 966 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TOM1L1O75674 476 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 RPLP0P05388 317 aaKnown RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3HP0C7X1 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 CYP11B2P19099 503 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 PDCP20941 246 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 HNRNPKP61978 463 aaKnown RBP eCLIP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 POU5F1Q01860 360 aaKnown RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 CST6Q15828 149 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3GQ6DHY5 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3CQ6IPX1 549 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 C4orf50Q6ZRC1 276 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 VASH1Q7L8A9 365 aaPredicted RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 SLC35F3Q8IY50 421 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 SLFN12Q8IYM2 578 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TBC1D3Q8IZP1 549 aaPredicted RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 PDCL2Q8N4E4 241 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 OR6B3Q8NGW1 331 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 STARD8Q92502 1023 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 KIAA1143Q96AT1 154 aaPredicted RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 C19orf60Q96EN9 201 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 HAPLN3Q96S86 360 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 MYOCQ99972 504 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 SLAMF7Q9NQ25 335 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 PLA2G4CQ9UP65 541 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 DMTF1Q9Y222 760 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 RPH3AQ9Y2J0 694 aaPredicted RBP7.3□□□□□ -1.24
UBE2F-204ENST00000409953 PCDHGB6Q9Y5F9 930 aa7.3□□□□□ -1.24
UBE2F-204ENST00000409953 TNRC6AQ8NDV7 1962 aaKnown RBP7.29□□□□□ -1.24
UBE2F-204ENST00000409953 FLNAP21333 2647 aaKnown RBP7.29□□□□□ -1.24
UBE2F-204ENST00000409953 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.29□□□□□ -1.24
UBE2F-204ENST00000409953 A0A0B4J269 797 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 CCDC189A1A4V9 331 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 KPNA7A9QM74 516 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 F8VP50 259 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 PRAMEF26H0Y7S4 382 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 ZBTB43O43298 467 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 TIMM44O43615 452 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 RAD1O60671 282 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 RNASEH1O60930 286 aaKnown RBP7.29□□□□□ -1.24
UBE2F-204ENST00000409953 XRCC6P12956 609 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBE2F-204ENST00000409953 TCN2P20062 427 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 NUDT1P36639 197 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 MATR3P43243 847 aaKnown RBP eCLIP7.29□□□□□ -1.242e-6■■■■□ 22
UBE2F-204ENST00000409953 ARSDP51689 593 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 CCL7P80098 99 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 MC1RQ01726 317 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 MCL1Q07820 350 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 SV2CQ496J9 727 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 ANKRD45Q5TZF3 282 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 FYB2Q5VWT5 728 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 TMEM198Q66K66 360 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 PCGF5Q86SE9 256 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 NAGSQ8N159 534 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 NXPE1Q8N323 547 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 Q8NA96 180 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 PDZD8Q8NEN9 1154 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 OR13H1Q8NG92 308 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 FBXO32Q969P5 355 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 PMEPA1Q969W9 287 aa7.29□□□□□ -1.24
UBE2F-204ENST00000409953 MYLPFQ96A32 169 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms