RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TTC39AQ5SRH9 613 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 ERAP2Q6P179 960 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 ANKS1BQ7Z6G8 1248 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 CACNA2D3Q8IZS8 1091 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 KCNJ9Q92806 393 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 MSI2Q96DH6 328 aaKnown RBP4.56□□□□□ -1.68
PMS1-203ENST00000409593 TRAPPC9Q96Q05 1148 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 MAGEH1Q9H213 219 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 NDUFAF4Q9P032 175 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 GRHPRQ9UBQ7 328 aa4.56□□□□□ -1.68
PMS1-203ENST00000409593 ATG13O75143 517 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 OAZ2O95190 189 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 CHRNA5P30532 468 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 STAT1P42224 750 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 ADPRHP54922 357 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 GPR162Q16538 588 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 SLC30A9Q6PML9 568 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 TMEM200AQ86VY9 491 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 CCDC25Q86WR0 208 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 ENDOVQ8N8Q3 282 aaKnown RBP4.55□□□□□ -1.68
PMS1-203ENST00000409593 STT3BQ8TCJ2 826 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 RUBCNQ92622 972 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 LPAR1Q92633 364 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 PIGSQ96S52 555 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 HDHD5Q9BXW7 423 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 FZD3Q9NPG1 666 aa4.55□□□□□ -1.68
PMS1-203ENST00000409593 H0YGN5 161 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 NEURL1O76050 574 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 CHKAP35790 457 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 CDK18Q07002 472 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 ODF3L2Q3SX64 289 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 TTLL5Q6EMB2 1281 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 DGAT2L7PQ6IED9 249 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 ZNF549Q6P9A3 640 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 RINLQ6ZS11 566 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 VPS52Q8N1B4 723 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 ENAHQ8N8S7 591 aaPredicted RBP4.54□□□□□ -1.68
PMS1-203ENST00000409593 SLC2A12Q8TD20 617 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 TMEM174Q8WUU8 243 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 GOLGA1Q92805 767 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 ARRDC3Q96B67 414 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 SPAG4Q9NPE6 437 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 KCND3Q9UK17 655 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 PKP3Q9Y446 797 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 TCRBV7S3A2A0A539 114 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 KCNJ18B7U540 433 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 H0Y3Z8 333 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 INSIG1O15503 277 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 KRT38O76015 456 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 FGF2P09038 288 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 PRPH2P23942 346 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 RHAGQ02094 409 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 TUBB8Q3ZCM7 444 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 LRRC24Q50LG9 513 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 ENTPD8Q5MY95 495 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 C10orf62Q5T681 223 aaPredicted RBP4.54□□□□□ -1.68
PMS1-203ENST00000409593 SYT13Q7L8C5 426 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 TMEM217Q8N7C4 229 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 FAM110DQ8TAY7 271 aaPredicted RBP4.54□□□□□ -1.68
PMS1-203ENST00000409593 OTUD7AQ8TE49 926 aaPredicted RBP4.54□□□□□ -1.68
PMS1-203ENST00000409593 TRIM31Q9BZY9 425 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 CLPBQ9H078 707 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 TAF1DQ9H5J8 278 aaPredicted RBP4.54□□□□□ -1.68
PMS1-203ENST00000409593 TASP1Q9H6P5 420 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 ZNF304Q9HCX3 659 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 RCE1Q9Y256 329 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 DTX4Q9Y2E6 619 aa4.54□□□□□ -1.68
PMS1-203ENST00000409593 CYP21A2P08686 494 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 TBXAS1P24557 533 aaPredicted RBP4.53□□□□□ -1.68
PMS1-203ENST00000409593 KLRC2P26717 231 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 GSTM2P28161 218 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 CDC25AP30304 524 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 TRAPPC10P48553 1259 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 HTR6P50406 440 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 CDK7P50613 346 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 OAZ1P54368 228 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 PRKAA2P54646 552 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 FOXG1P55316 489 aaPredicted RBP4.53□□□□□ -1.68
PMS1-203ENST00000409593 ZBTB16Q05516 673 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 TANGO2Q6ICL3 276 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 LVRNQ6Q4G3 990 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 RNF144BQ7Z419 303 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 MYCT1Q8N699 235 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 ASB5Q8WWX0 329 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 ARHGAP39Q9C0H5 1083 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 IL21RQ9HBE5 538 aa4.53□□□□□ -1.68
PMS1-203ENST00000409593 NPIPB13A6NJU9 1138 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 NPIPB5A8MRT5 1133 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 NPIPB4C9JG80 1138 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 IPO5O00410 1097 aaKnown RBP4.52□□□□□ -1.69
PMS1-203ENST00000409593 HNRNPRO43390 633 aaKnown RBP4.52□□□□□ -1.69
PMS1-203ENST00000409593 LCKP06239 509 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 LYL1P12980 280 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 PKMP14618 531 aaKnown RBP4.52□□□□□ -1.69
PMS1-203ENST00000409593 POLD2P49005 469 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 CYP2J2P51589 502 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 P2RX3P56373 397 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 MAPK7Q13164 816 aa4.52□□□□□ -1.69
PMS1-203ENST00000409593 ALKBH1Q13686 389 aaKnown RBP4.52□□□□□ -1.69
PMS1-203ENST00000409593 GXYLT1Q4G148 440 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms