RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 CHPFQ8IZ52 775 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 OR7D4Q8NG98 312 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 WFIKKN2Q8TEU8 576 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 TBC1D31Q96DN5 1066 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 IER2Q9BTL4 223 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 GOLPH3Q9H4A6 298 aa16.21■□□□□ 0.19
MBD1-207ENST00000398488 NOL6Q9H6R4 1146 aaKnown RBP16.21■□□□□ 0.19
MBD1-207ENST00000398488 SNAP91O60641 907 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 ATG13O75143 517 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 PAPSS2O95340 614 aaPredicted RBP16.2■□□□□ 0.18
MBD1-207ENST00000398488 RHOCP08134 193 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 RHOQP17081 205 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 GOT1P17174 413 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 POLR2EP19388 210 aaKnown RBP16.2■□□□□ 0.18
MBD1-207ENST00000398488 GLDCP23378 1020 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 NTSR1P30989 418 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 STK19P49842 368 aaPredicted RBP16.2■□□□□ 0.18
MBD1-207ENST00000398488 AIF1P55008 147 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 EIF4HQ15056 248 aaKnown RBP16.2■□□□□ 0.18
MBD1-207ENST00000398488 SPA17Q15506 151 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 HEATR6Q6AI08 1181 aaKnown RBP16.2■□□□□ 0.18
MBD1-207ENST00000398488 NETO2Q8NC67 525 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 KCNV2Q8TDN2 545 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 HSPH1Q92598 858 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 NELL1Q92832 810 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 RPL10LQ96L21 214 aaKnown RBP16.2■□□□□ 0.18
MBD1-207ENST00000398488 GABRG3Q99928 467 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 SLC6A17Q9H1V8 727 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 FAM86C1Q9NVL1 165 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 TMEM248Q9NWD8 314 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 CWC15Q9P013 229 aaKnown RBP16.2■□□□□ 0.18
MBD1-207ENST00000398488 TRIM10Q9UDY6 481 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 DNAI1Q9UI46 699 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 SLCO3A1Q9UIG8 710 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 MFHAS1Q9Y4C4 1052 aa16.2■□□□□ 0.18
MBD1-207ENST00000398488 CD48P09326 243 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 DLDP09622 509 aaKnown RBP16.19■□□□□ 0.18
MBD1-207ENST00000398488 EPHB2P29323 1055 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 OR1E1P30953 314 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 ACVRL1P37023 503 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 FNTBP49356 437 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 ARSEP51690 589 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 GSDMDP57764 484 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 PPP6R3Q5H9R7 873 aaPredicted RBP16.19■□□□□ 0.18
MBD1-207ENST00000398488 ACBD5Q5T8D3 534 aaPredicted RBP16.19■□□□□ 0.18
MBD1-207ENST00000398488 NUDT18Q6ZVK8 323 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 RHOT2Q8IXI1 618 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 TMEM245Q9H330 911 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 KLHL11Q9NVR0 708 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 FBXO4Q9UKT5 387 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 SLC8A2Q9UPR5 921 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 ERVW-1Q9UQF0 538 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 ACTL7AQ9Y615 435 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 CACNA1HO95180 2353 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 TIMM44O43615 452 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 BUB1BO60566 1050 aaPredicted RBP16.19■□□□□ 0.18
MBD1-207ENST00000398488 MT-CO1P00395 513 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 HOXB2P14652 356 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 DESP17661 470 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 GJC1P36383 396 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 SSR1P43307 286 aaKnown RBP16.19■□□□□ 0.18
MBD1-207ENST00000398488 EOGTQ5NDL2 527 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 CCDC117Q8IWD4 279 aaPredicted RBP16.19■□□□□ 0.18
MBD1-207ENST00000398488 LRRC8AQ8IWT6 810 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 TP53INP2Q8IXH6 220 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 ZNF557Q8N988 423 aaPredicted RBP16.19■□□□□ 0.18
MBD1-207ENST00000398488 ACDQ96AP0 544 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 PHOX2BQ99453 314 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 KLC2Q9H0B6 622 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 PCDH18Q9HCL0 1135 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.19■□□□□ 0.18
MBD1-207ENST00000398488 ETNK2Q9NVF9 386 aa16.19■□□□□ 0.18
MBD1-207ENST00000398488 TTC34A8MYJ7 566 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 EEF2KO00418 725 aaKnown RBP16.18■□□□□ 0.18
MBD1-207ENST00000398488 BUB1O43683 1085 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 ZMPSTE24O75844 475 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 IL4RP24394 825 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 MAN1A1P33908 653 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 MRE11P49959 708 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 VAV2P52735 878 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 TPI1P60174 286 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 CCZ1BP86790 482 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 CCZ1P86791 482 aaPredicted RBP16.18■□□□□ 0.18
MBD1-207ENST00000398488 ECT2LQ008S8 904 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 MMRN1Q13201 1228 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 SRSF5Q13243 272 aaKnown RBP16.18■□□□□ 0.18
MBD1-207ENST00000398488 DPYSL2Q16555 572 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 HSF5Q4G112 596 aaPredicted RBP16.18■□□□□ 0.18
MBD1-207ENST00000398488 FNDC3BQ53EP0 1204 aaKnown RBP16.18■□□□□ 0.18
MBD1-207ENST00000398488 BOLA3Q53S33 107 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 SETD3Q86TU7 594 aaPredicted RBP16.18■□□□□ 0.18
MBD1-207ENST00000398488 RTL3Q8N8U3 475 aaKnown RBP16.18■□□□□ 0.18
MBD1-207ENST00000398488 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 UCMAQ8WVF2 138 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 EPAS1Q99814 870 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 MUC3BQ9H195 1237 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 VPS28Q9UK41 221 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 R4GN57 208 aa16.18■□□□□ 0.18
MBD1-207ENST00000398488 DMDP11532 3685 aa16.17■□□□□ 0.18
MBD1-207ENST00000398488 ILVBLA1L0T0 632 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms