RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 APLFQ8IW19 511 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-204ENST00000397545 DNAJB3Q8WWF6 145 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 GLMNQ92990 594 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 FAR2Q96K12 515 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 RNF145Q96MT1 663 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 SMAD5Q99717 465 aaKnown RBP10.97□□□□□ -0.65
CCDC40-204ENST00000397545 SYT15Q9BQS2 421 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 WDR41Q9HAD4 459 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 MID1IP1Q9NPA3 183 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 PNPOQ9NVS9 261 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 UBIAD1Q9Y5Z9 338 aa10.97□□□□□ -0.65
CCDC40-204ENST00000397545 HNRNPCL2B2RXH8 293 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 TRDMT1O14717 391 aaKnown RBP10.96□□□□□ -0.65
CCDC40-204ENST00000397545 PAEPP09466 180 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 THPOP40225 353 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 NUP107P57740 925 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 BNIP1Q12981 228 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 CAPSQ13938 189 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 DEPDC1Q5TB30 811 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 GRTP1Q5TC63 336 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 HEATR4Q86WZ0 1026 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 TRAPPC9Q96Q05 1148 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 NR1H4Q96RI1 486 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-204ENST00000397545 RBBP8Q99708 897 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 ULBP1Q9BZM6 244 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 ASB7Q9H672 318 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 CST3P01034 146 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-204ENST00000397545 ITGAVP06756 1048 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 ABHD2P08910 425 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 POU1F1P28069 291 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 MAPK11Q15759 364 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 CYP51A1Q16850 503 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 CCDC153Q494R4 210 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 PTPN20Q4JDL3 420 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 LRRC38Q5VT99 294 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 MFSD14CQ5VZR4 134 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 PHF13Q86YI8 300 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-204ENST00000397545 ULK2Q8IYT8 1036 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 CYP4X1Q8N118 509 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 SAMD3Q8N6K7 520 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 ACOX2Q99424 681 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 CINPQ9BW66 212 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-204ENST00000397545 KLHL25Q9H0H3 589 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 DENND2DQ9H6A0 471 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-204ENST00000397545 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 GRIN2DO15399 1336 aa10.96□□□□□ -0.65
CCDC40-204ENST00000397545 LRRC37AA6NMS7 1700 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 SLC12A8A0AV02 714 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 TMEM191CA6NGB0 347 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 SPDYE5A6NIY4 337 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 GSC2O15499 205 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 TNFAIP8O95379 198 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 GUCA1CO95843 209 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 THP07101 528 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 USP17L7P0C7H9 530 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 NCKAP1LP55160 1127 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 SPDYE7PQ495Y7 208 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 MARC1Q5VT66 337 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 RNF220Q5VTB9 566 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 AMIGO2Q86SJ2 522 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 TRPM4Q8TD43 1214 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 PGLYRP2Q96PD5 576 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 B3GNT5Q9BYG0 378 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 PHACTR1Q9C0D0 580 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF556Q9HAH1 456 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 SIX2Q9NPC8 291 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 NMRK2Q9NPI5 230 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 CNTNAP2Q9UHC6 1331 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 ZMYM2Q9UBW7 1377 aa10.96□□□□□ -0.66
CCDC40-204ENST00000397545 C5orf58C9J3I9 102 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 VPS26AO75436 327 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 GLP2RO95838 553 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 TRUB2O95900 331 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 GOT1P17174 413 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ALDH1A3P47895 512 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 HARS2P49590 506 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ZNF143P52747 638 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 LPCAT4Q643R3 524 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 FOXR2Q6PJQ5 311 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ARHGAP22Q7Z5H3 698 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 DCP1BQ8IZD4 617 aaKnown RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 DAW1Q8N136 415 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 HELQQ8TDG4 1101 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 WDR55Q9H6Y2 383 aaPredicted RBP10.95□□□□□ -0.66
CCDC40-204ENST00000397545 IMPAD1Q9NX62 359 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 GRHL1Q9NZI5 618 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 ITGA11Q9UKX5 1188 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 DSEQ9UL01 958 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 C2orf81A6NN90 581 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CCNE2O96020 404 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 TPBGLP0DKB5 382 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 TGFB3P10600 412 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 MMP8P22894 467 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 TUBP50607 506 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 RPTORQ8N122 1335 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 BSNDQ8WZ55 320 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 FIG4Q92562 907 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 FBXO32Q969P5 355 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CERS2Q96G23 380 aa10.95□□□□□ -0.66
CCDC40-204ENST00000397545 CPNE1Q99829 537 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms