RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 RFWD3Q6PCD5 774 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 DHRS13Q6UX07 377 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 MARCH9Q86YJ5 346 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 CCDC117Q8IWD4 279 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-208ENST00000397204 OR2T34Q8NGX1 318 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 EEF2KMTQ96G04 330 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 MYO19Q96H55 970 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 CCDC34Q96HJ3 373 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 HSFY1Q96LI6 401 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 BBC3Q96PG8 261 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-208ENST00000397204 OMDQ99983 421 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 NEUROG2Q9H2A3 272 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 FZD4Q9ULV1 537 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 CKAP5Q14008 2032 aa9.08□□□□□ -0.96
CAPN3-208ENST00000397204 MGAQ8IWI9 3026 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 PTPRQQ9UMZ3 2332 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 A0A1W2PQ27 194 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 A0A1W2PQ64 194 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 TYW5A2RUC4 315 aaKnown RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 FAM149AA5PLN7 773 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 FAM47DPA6NHR8 397 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 C10orf142B7Z368 130 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 ENC1O14682 589 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SLC16A3O15427 465 aaKnown RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 MSI1O43347 362 aaKnown RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SIN3BO75182 1162 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 FBXO21O94952 628 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 ITGAVP06756 1048 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SRPRAP08240 638 aaKnown RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 PAEPP09466 180 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 FBXO45P0C2W1 286 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 LCP1P13796 627 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 GOT1P17174 413 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 ABCB4P21439 1286 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 TBXAS1P24557 533 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CD38P28907 300 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SLC6A4P31645 630 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SLC8A1P32418 973 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 HNF1BP35680 557 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CSKP41240 450 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 ARRB1P49407 418 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SGSHP51688 502 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 TBX4P57082 545 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 KRT85P78386 507 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 FKBP3Q00688 224 aaKnown RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 PKP1Q13835 747 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 STILQ15468 1287 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CST6Q15828 149 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CBWD6Q4V339 395 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CCDC157Q569K6 752 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SLC45A4Q5BKX6 768 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 FAM133BQ5BKY9 247 aaKnown RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CBWD3Q5JTY5 395 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CBWD5Q5RIA9 395 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 PRAMEF14Q5SWL7 426 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 C6orf118Q5T5N4 469 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 C9orf64Q5T6V5 341 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 TCERG1LQ5VWI1 586 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 PMF1Q6P1K2 205 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 NCEH1Q6PIU2 408 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SND1Q7KZF4 910 aaKnown RBP eCLIP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 MFN1Q8IWA4 741 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 HSCBQ8IWL3 235 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 CACTIN-AS1Q8N1I8 211 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 UBR7Q8N806 425 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 HJURPQ8NCD3 748 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 WFDC5Q8TCV5 224 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 SAP25Q8TEE9 199 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 MRGPRX3Q96LB0 322 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 FAM129BQ96TA1 746 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 MTG2Q9H4K7 406 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 ERVMER34-1Q9H9K5 563 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 GDF3Q9NR23 364 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 STIM2Q9P246 746 aa9.07□□□□□ -0.96
CAPN3-208ENST00000397204 INTS6Q9UL03 887 aaKnown RBP9.07□□□□□ -0.96
CAPN3-208ENST00000397204 ZNF462Q96JM2 2506 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 EDDM13A0A1B0GTR0 161 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 A0A1W2PR77 199 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 TLR4O00206 839 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 PMM2O15305 246 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 RFPL3O75679 317 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 RNASEH2AO75792 299 aaKnown RBP9.06□□□□□ -0.96
CAPN3-208ENST00000397204 ZNF202O95125 648 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 MOCS3O95396 460 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 LTFP02788 710 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 WNT1P04628 370 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 C5AR1P21730 350 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 NUDT1P36639 197 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 ABCG1P45844 678 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 RXRGP48443 463 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 RAB15P59190 212 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 ECT2LQ008S8 904 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 ILKQ13418 452 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 KCNJ12Q14500 433 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 COBLL1Q53SF7 1204 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 MS4A13Q5J8X5 152 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 NADSYN1Q6IA69 706 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 LAYNQ6UX15 382 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 BEND5Q7L4P6 421 aa9.06□□□□□ -0.96
CAPN3-208ENST00000397204 GATAD2AQ86YP4 633 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms