RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 DAOAP59103 153 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PDK4Q16654 411 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 KBTBD12Q3ZCT8 623 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ZNF394Q53GI3 561 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 MFSD7Q6UXD7 560 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ADAT2Q7Z6V5 191 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 SPATA24Q86W54 205 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PPIL6Q8IXY8 311 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ALDH16A1Q8IZ83 802 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PLD5Q8N7P1 536 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 JOSD2Q8TAC2 188 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 RAB3IL1Q8TBN0 382 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ZNF689Q96CS4 500 aaPredicted RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 MCEEQ96PE7 176 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 TCHPQ9BT92 498 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 PCDH18Q9HCL0 1135 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 CRTAC1Q9NQ79 661 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 METTL5Q9NRN9 209 aaKnown RBP5.51□□□□□ -1.53
VPS41-203ENST00000395969 ZDHHC7Q9NXF8 308 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 ZFP69BQ9UJL9 534 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 FBXW11Q9UKB1 542 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 GRID1Q9ULK0 1009 aa5.51□□□□□ -1.53
VPS41-203ENST00000395969 GBF1Q92538 1859 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 SMIM31A0A1B0GVY4 71 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 A0A1W2PQ45 241 aaPredicted RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 A0A1W2PQY0 241 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 FAM47DPA6NHR8 397 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 F8VP50 259 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 F8W8V4 182 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 MGEA5O60502 916 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 CDH16O75309 829 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ZWINTO95229 277 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ACSL3O95573 720 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 IDO1P14902 403 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 GRIA2P42262 883 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PPP3CCP48454 512 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 DSG1Q02413 1049 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PLOD1Q02809 727 aaPredicted RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 KRT17Q04695 432 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ELAVL2Q12926 359 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 ITGA9Q13797 1035 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 TMEM259Q4ZIN3 620 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 FAM91A1Q658Y4 838 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 FAM217AQ8IXS0 508 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ZMIZ2Q8NF64 920 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 WDR60Q8WVS4 1066 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 MAML1Q92585 1016 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PEX13Q92968 403 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 HDAC11Q96DB2 347 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 TRMT2BQ96GJ1 504 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 SLC39A13Q96H72 371 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 CAPNS2Q96L46 248 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 SMC6Q96SB8 1091 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ECSITQ9BQ95 431 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 TUBB6Q9BUF5 446 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 MRPL9Q9BYD2 267 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 IQCGQ9H095 443 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS41-203ENST00000395969 PTTG2Q9NZH5 202 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PAK5Q9P286 719 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 NAALADL1Q9UQQ1 740 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 SCN8AQ9UQD0 1980 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 MUC22E2RYF6 1773 aaPredicted RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 E5RJQ4 531 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 M0QYV0 167 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 HUS1O60921 280 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 FKTNO75072 461 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ATP5BP06576 529 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 SELPP16109 830 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PSMA2P25787 234 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 GCAP28676 217 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 CCND3P30281 292 aaPredicted RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 FDFT1P37268 417 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 RAP1GDS1P52306 607 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ATN1P54259 1190 aaPredicted RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 SP4Q02446 784 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 GALNT2Q10471 571 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 BFSP2Q13515 415 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 MAP7Q14244 749 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 MBTPS1Q14703 1052 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 DEFB115Q30KQ5 88 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 KCTD11Q693B1 232 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 AADACL2Q6P093 401 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 DUS1LQ6P1R4 473 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 KLC3Q6P597 504 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 RFX8Q6ZV50 586 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ACAD11Q709F0 780 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 NLRP9Q7RTR0 991 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 RTN4RL1Q86UN2 441 aaPredicted RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 CDKL3Q8IVW4 592 aaPredicted RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 SLC7A14Q8TBB6 771 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 PPP2R3CQ969Q6 453 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 VWCEQ96DN2 955 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 MYRFLQ96LU7 910 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 CASD1Q96PB1 797 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 CDK5RAP1Q96SZ6 601 aaKnown RBP5.5□□□□□ -1.53
VPS41-203ENST00000395969 TMUB1Q9BVT8 246 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 CXCL16Q9H2A7 254 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 ALG2Q9H553 416 aa5.5□□□□□ -1.53
VPS41-203ENST00000395969 AGO3Q9H9G7 860 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms