RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PCDH9Q9HC56 1237 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 IL23AQ9NPF7 189 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SPATS2LQ9NUQ6 558 aaKnown RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 RRN3Q9NYV6 651 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 DTLQ9NZJ0 730 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 CXXC1Q9P0U4 656 aaPredicted RBP7.15□□□□□ -1.27
RTN4-205ENST00000394609 MTRRQ9UBK8 725 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 PRKAG2Q9UGJ0 569 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 SLC12A4Q9UP95 1085 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 TSC2P49815 1807 aa7.15□□□□□ -1.27
RTN4-205ENST00000394609 ZNF487B1APH4 448 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 EFCAB14O75071 495 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 CSPG5O95196 566 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 SEC24AO95486 1093 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 ATP6V1G2O95670 118 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 MOCS2O96007 188 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 SOD2P04179 222 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 ZFXP17010 805 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 ATF6P18850 670 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 STIP1P31948 543 aaKnown RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 GBP2P32456 591 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 ATP1A2P50993 1020 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 ELF3P78545 371 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 MTM1Q13496 603 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 HP1BP3Q5SSJ5 553 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 SLC8B1Q6J4K2 584 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 HIBCHQ6NVY1 386 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 VSIG1Q86XK7 387 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 RNF168Q8IYW5 571 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 VPS52Q8N1B4 723 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 SH2D3CQ8N5H7 860 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 COLGALT1Q8NBJ5 622 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 FBXO32Q969P5 355 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 NTAN1Q96AB6 310 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 LGMNQ99538 433 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 TRIM62Q9BVG3 475 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 EPB41L4BQ9H329 900 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 RC3H2Q9HBD1 1191 aaKnown RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 SPG21Q9NZD8 308 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 OR12D3Q9UGF7 316 aa7.14□□□□□ -1.27
RTN4-205ENST00000394609 XPO7Q9UIA9 1087 aaKnown RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 CORO1CQ9ULV4 474 aaPredicted RBP7.14□□□□□ -1.27
RTN4-205ENST00000394609 TANC1Q9C0D5 1861 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 A0A1W2PRU2 124 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 TCRBV7S3A2A0A539 114 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CCT8L1PA6NM43 557 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 DNALI1O14645 258 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 IRAK2O43187 625 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 MFSD11O43934 449 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 BAIAP3O94812 1187 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 LRIG2O94898 1065 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 IGLV3-25P01717 112 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 FGBP02675 491 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SHBGP04278 402 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SPATA31D3P0C874 917 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RARGP13631 454 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SYN1P17600 705 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ERCC2P18074 760 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 LAG3P18627 525 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 EPHB2P29323 1055 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CCR1P32246 355 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CA8P35219 290 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 NR2C2P49116 596 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 GLUD2P49448 558 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 TPI1P60174 286 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RPL10AP62906 217 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 BASP1P80723 227 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 SARNPP82979 210 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 GAD2Q05329 585 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SCAPQ12770 1279 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 EFEMP1Q12805 493 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SMARCB1Q12824 385 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SEMA3BQ13214 749 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 EIF4EBP2Q13542 120 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 DPYSQ14117 519 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SLC29A2Q14542 456 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SKIDA1Q1XH10 827 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RASIP1Q5U651 963 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ANKRD22Q5VYY1 191 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RWDD4Q6NW29 188 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 SPATA31D4Q6ZUB0 917 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 BEND5Q7L4P6 421 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 UBE2Q1Q7Z7E8 422 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 MIB1Q86YT6 1006 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CMTR2Q8IYT2 770 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 BBOF1Q8ND07 529 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CCDC110Q8TBZ0 833 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 TLCD1Q96CP7 247 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CHMP6Q96FZ7 201 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SPATA17Q96L03 361 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 PABPC3Q9H361 631 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 CENPHQ9H3R5 247 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SMOC2Q9H3U7 446 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CYP4F11Q9HBI6 524 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 LRRC4CQ9HCJ2 640 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 IL37Q9NZH6 218 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RCOR3Q9P2K3 495 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 CTNNAL1Q9UBT7 734 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 C15orf41Q9Y2V0 281 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 BACE2Q9Y5Z0 518 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms