RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 LAMB3Q13751 1172 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 TAF5Q15542 800 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 SMTNL2Q2TAL5 461 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 GXYLT1Q4G148 440 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 LRRC24Q50LG9 513 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 SLC30A9Q6PML9 568 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 B4GALNT4Q76KP1 1039 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 MOGAT3Q86VF5 341 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 NRACQ8N912 160 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 ANKRD42Q8N9B4 389 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 MPLKIPQ8TAP9 179 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 IP6K1Q92551 441 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 HMCESQ96FZ2 354 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 FCRL4Q96PJ5 515 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 PSMD1Q99460 953 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 HDHD5Q9BXW7 423 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 TRIM31Q9BZY9 425 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 CLPBQ9H078 707 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 FOXP1Q9H334 677 aaPredicted RBP3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 AAMDCQ9H7C9 122 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 PLEKHA2Q9HB19 425 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 THSD1Q9NS62 852 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 ARL15Q9NXU5 204 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 FBXO4Q9UKT5 387 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 DTX4Q9Y2E6 619 aa3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.4□□□□□ -1.87
RNU6-550P-201ENST00000391057 LY6G6EA0A0G2JKS1 128 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 NPIPB13A6NJU9 1138 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 NPIPB5A8MRT5 1133 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 FOXO6A8MYZ6 492 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 NPIPB4C9JG80 1138 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 SYN3O14994 580 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 CCNT1O60563 726 aaKnown RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ZC3H11AO75152 810 aaKnown RBP eCLIP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 BMP15O95972 392 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 LYL1P12980 280 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ACP5P13686 325 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 CHN1P15882 459 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 HOXB9P17482 250 aaPredicted RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 RXRAP19793 462 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 CHRNA5P30532 468 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 PNPLA4P41247 253 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 NR4A2P43354 598 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ARL4CP56559 192 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 RHAGQ02094 409 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 GAD2Q05329 585 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 PMPCAQ10713 525 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 INPP5JQ15735 1006 aaPredicted RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 RUNDC3AQ59EK9 446 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ALG10Q5BKT4 473 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ALG10BQ5I7T1 473 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 TTC39AQ5SRH9 613 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 C6orf10Q5SRN2 563 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 LDHAL6AQ6ZMR3 332 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 RASGRP2Q7LDG7 609 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 PIP4P1Q86T03 277 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 C2CD5Q86YS7 1000 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 SCN4BQ8IWT1 228 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 FTSJ3Q8IY81 847 aaKnown RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 VPS52Q8N1B4 723 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 TMEM57Q8N5G2 664 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ZNF548Q8NEK5 533 aaPredicted RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 FAM110DQ8TAY7 271 aaPredicted RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 SPPL3Q8TCT6 385 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 MORC4Q8TE76 937 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 SCARB1Q8WTV0 552 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 CENPIQ92674 756 aaPredicted RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 KAT2AQ92830 837 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 EME1Q96AY2 570 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 TBC1D20Q96BZ9 403 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 KTI12Q96EK9 354 aaPredicted RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ZNF48Q96MX3 618 aaPredicted RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 WDR83Q9BRX9 315 aaKnown RBP3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ISCA1Q9BUE6 129 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 ARHGAP39Q9C0H5 1083 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 TWSG1Q9GZX9 223 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 CHODLQ9H9P2 273 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 DECR2Q9NUI1 292 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 POT1Q9NUX5 634 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 MSRB1Q9NZV6 116 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 FEM1BQ9UK73 627 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 COG5Q9UP83 839 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 TNFRSF18Q9Y5U5 241 aa3.39□□□□□ -1.87
RNU6-550P-201ENST00000391057 A0A0G2JK05 382 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 TPD52L2O43399 206 aaKnown RBP3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 PIP5K1CO60331 668 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 TULP3O75386 442 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 NEURL1O76050 574 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 SYF2O95926 243 aaKnown RBP3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 LCKP06239 509 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 CSF1P09603 554 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 CYP4B1P13584 511 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 ALDH7A1P49419 539 aaKnown RBP3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 PAPOLAP51003 745 aaKnown RBP3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 CYP2J2P51589 502 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 ZNF484Q5JVG2 852 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 RNF144BQ7Z419 303 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 PIM3Q86V86 326 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 IGFN1Q86VF2 1251 aa3.38□□□□□ -1.87
RNU6-550P-201ENST00000391057 CCDC25Q86WR0 208 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms