RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ACBD5Q5T8D3 534 aaPredicted RBP23.66■■□□□ 1.38
VPS16-201ENST00000380443 OTOAQ7RTW8 1153 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 SCD5Q86SK9 330 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 TP53INP2Q8IXH6 220 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 COMMD8Q9NX08 183 aa23.66■■□□□ 1.38
VPS16-201ENST00000380443 ZNF638Q14966 1978 aaKnown RBP23.65■■□□□ 1.38
VPS16-201ENST00000380443 ZBTB24O43167 697 aaPredicted RBP23.65■■□□□ 1.38
VPS16-201ENST00000380443 CACNG3O60359 315 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 PAGE1O75459 146 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 UBOX5O94941 541 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 SERPINB4P48594 390 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 SCN4BQ8IWT1 228 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 FAM111AQ96PZ2 611 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 CEP41Q9BYV8 373 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 SLCO1B3Q9NPD5 702 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 SYBUQ9NX95 663 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 IL37Q9NZH6 218 aa23.65■■□□□ 1.38
VPS16-201ENST00000380443 AAR2Q9Y312 384 aaKnown RBP23.65■■□□□ 1.38
VPS16-201ENST00000380443 WASH4PA8MWX3 477 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 KCNU1A8MYU2 1149 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 RASSF9O75901 435 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 MRPL58Q14197 206 aaKnown RBP23.64■■□□□ 1.38
VPS16-201ENST00000380443 FAM182AQ5T1J6 154 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 NAPEPLDQ6IQ20 393 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 ABI1Q8IZP0 508 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 SPOCK2Q92563 424 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 ABI2Q9NYB9 513 aaPredicted RBP23.64■■□□□ 1.38
VPS16-201ENST00000380443 VANGL2Q9ULK5 521 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 NEU3Q9UQ49 428 aa23.64■■□□□ 1.38
VPS16-201ENST00000380443 ARHGAP42A6NI28 874 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 BIRC5O15392 142 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 HOXA2O43364 376 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 B4GALT3O60512 393 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 USP1O94782 785 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 SRGAP2BP0DMP2 458 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 CD68P34810 354 aaPredicted RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 VARS2Q5ST30 1063 aaKnown RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 GRTP1Q5TC63 336 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 ARMC3Q5W041 872 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 ATG16L1Q676U5 607 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 ZNF280DQ6N043 979 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 TIGD7Q6NT04 549 aaPredicted RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 RWDD4Q6NW29 188 aaKnown RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 KYAT3Q6YP21 454 aaKnown RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 TMEM135Q86UB9 458 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 FITM2Q8N6M3 262 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 CASP10Q92851 521 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 GORASP1Q9BQQ3 440 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 TSSK1BQ9BXA7 367 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 IL22Q9GZX6 179 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 TLR6Q9Y2C9 796 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 PCDHB7Q9Y5E2 793 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 SNX10Q9Y5X0 201 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 FAM237BA0A1B0GVD1 139 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 F8W810 466 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 C2CD2LO14523 706 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 PSEN1P49768 467 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 CDK7P50613 346 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 SF3A3Q12874 501 aaKnown RBP eCLIP23.63■■□□□ 1.374e-11■■■■■ 39.5
VPS16-201ENST00000380443 ELAVL2Q12926 359 aaKnown RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 ZBTB17Q13105 803 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 PACS1Q6VY07 963 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 PACS2Q86VP3 889 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 NETO2Q8NC67 525 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 OR52K1Q8NGK4 314 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 ZSCAN18Q8TBC5 510 aaPredicted RBP23.63■■□□□ 1.37
VPS16-201ENST00000380443 C10orf82Q8WW14 230 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 ATP2A3Q93084 1043 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 RMDN2Q96LZ7 410 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 CPNE1Q99829 537 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 SLC40A1Q9NP59 571 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 TXNDC16Q9P2K2 825 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 ADAM28Q9UKQ2 775 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 RPS6KL1Q9Y6S9 549 aa23.63■■□□□ 1.37
VPS16-201ENST00000380443 MYO18AQ92614 2054 aaKnown RBP23.62■■□□□ 1.37
VPS16-201ENST00000380443 ENPP3O14638 875 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 UGT1A9O60656 530 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 RTN3O95197 1032 aaPredicted RBP23.62■■□□□ 1.37
VPS16-201ENST00000380443 NEFHP12036 1026 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 MTA1Q13330 715 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 FAM133BQ5BKY9 247 aaKnown RBP23.62■■□□□ 1.37
VPS16-201ENST00000380443 ATPAF2Q8N5M1 289 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 CERS2Q96G23 380 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 FCRL2Q96LA5 508 aaPredicted RBP23.62■■□□□ 1.37
VPS16-201ENST00000380443 AGAP3Q96P47 875 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 LRRC37BQ96QE4 947 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 TRIM55Q9BYV6 548 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 UGT1A7Q9HAW7 530 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 UGT1A10Q9HAW8 530 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 UGT1A8Q9HAW9 530 aa23.62■■□□□ 1.37
VPS16-201ENST00000380443 OLA1Q9NTK5 396 aaKnown RBP23.62■■□□□ 1.37
VPS16-201ENST00000380443 A0A1W2PQH9 124 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 FAM92AA1XBS5 289 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 HMX2A2RU54 273 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 WDR91A4D1P6 747 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 ANXA9O76027 345 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 JCHAINP01591 159 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 NFKB1P19838 968 aa23.61■■□□□ 1.37
VPS16-201ENST00000380443 GP5P40197 560 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms