RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CACNA2D3Q8IZS8 1091 aa8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 TRMT61BQ9BVS5 477 aaKnown RBP8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 TRMT6Q9UJA5 497 aaKnown RBP8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 CNOT1A5YKK6 2376 aaKnown RBP8.65□□□□□ -1.03
CRNKL1-202ENST00000377340 EP300Q09472 2414 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 PTGESO14684 152 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SCAMP1O15126 338 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SMIM24O75264 130 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ZNF189O75820 626 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 TPD52P55327 224 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 NTHL1P78549 312 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SEMG2Q02383 582 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 RBBP7Q16576 425 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 UPP1Q16831 310 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 HSP90AA5PQ58FG0 334 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SPDYAQ5MJ70 313 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CHST9Q7L1S5 443 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SLC26A9Q7LBE3 791 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ZNF557Q8N988 423 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 FGD4Q96M96 766 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 EBF3Q9H4W6 596 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 LRRC40Q9H9A6 602 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 KIAA1522Q9P206 1035 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 COQ4Q9Y3A0 265 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SYNDIG1LA6NDD5 238 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SUPT3HB4E1H0 165 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 C1QTNF3-AMACRE9PGA6 284 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CFLARO15519 480 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 DIAPH2O60879 1101 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SUPT3HO75486 399 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 GLP2RO95838 553 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 NFKB1P19838 968 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MGAT1P26572 445 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MAT2AP31153 395 aaKnown RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 GPD2P43304 727 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 GBE1Q04446 702 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MTA1Q13330 715 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 AUHQ13825 339 aaKnown RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ARID3BQ8IVW6 561 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CASP10Q92851 521 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 TOX2Q96NM4 488 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 DDX23Q9BUQ8 820 aaKnown RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 TSSK1BQ9BXA7 367 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 EVLQ9UI08 416 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 STK38LQ9Y2H1 464 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ZFP37Q9Y6Q3 630 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 LRCH4O75427 683 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CLDN11O75508 207 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 BAIAP3O94812 1187 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CYP1A2P05177 515 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 GLI1P08151 1106 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CNPP09543 421 aaKnown RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MYOGP15173 224 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MAGEA10P43363 369 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CDH17Q12864 832 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 BRMS1LQ5PSV4 323 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CMTM8Q8IZV2 173 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MLPHQ9BV36 600 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SHCBP1LQ9BZQ2 653 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SDCBP2Q9H190 292 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ISCUQ9H1K1 167 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 TRABDQ9H4I3 376 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CRTAC1Q9NQ79 661 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ABCB8Q9NUT2 735 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 TDP1Q9NUW8 608 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 PKD2L2Q9NZM6 624 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 AGO1Q9UL18 857 aaKnown RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CHKBQ9Y259 395 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CRYL1Q9Y2S2 319 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 SQORQ9Y6N5 450 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ADGRA2Q96PE1 1338 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 C1orf232A0A0U1RR37 186 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 KCNU1A8MYU2 1149 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 TRIM49D1C9J1S8 452 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CTIFO43310 598 aaKnown RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CIB2O75838 187 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 PIAS1O75925 651 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 PPP3CCP48454 512 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 NR2C2P49116 596 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 DGKGP49619 791 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MOGSQ13724 837 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 STAT4Q14765 748 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CLLU1OSQ5K130 101 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 OTOP3Q7RTS5 596 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 OOSP2Q86WS3 158 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CRLF3Q8IUI8 442 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CCDC185Q8N715 623 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 OR14C36Q8NHC7 312 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 ZSCAN18Q8TBC5 510 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 STMN2Q93045 179 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 OXCT2Q9BYC2 517 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 PITPNM3Q9BZ71 974 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 PCDH18Q9HCL0 1135 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 CASS4Q9NQ75 786 aa8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 MARCOQ9UEW3 520 aaPredicted RBP8.64□□□□□ -1.03
CRNKL1-202ENST00000377340 FGF19O95750 216 aa8.63□□□□□ -1.03
CRNKL1-202ENST00000377340 MSH3P20585 1137 aa8.63□□□□□ -1.03
CRNKL1-202ENST00000377340 MZF1P28698 734 aaPredicted RBP8.63□□□□□ -1.03
CRNKL1-202ENST00000377340 TIE1P35590 1138 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms