RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 KBTBD12Q3ZCT8 623 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 SCARA3Q6AZY7 606 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 RETSATQ6NUM9 610 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 CYB5D1Q6P9G0 228 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 MAP4K3Q8IVH8 894 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 ACSS2Q9NR19 701 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 ETNK2Q9NVF9 386 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 ST3GAL5Q9UNP4 418 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 FAM47E-STBD1D6RA91 191 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 FFAR3O14843 346 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 GPR42O15529 346 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 ZMPSTE24O75844 475 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 HNRNPH1P31943 449 aaKnown RBP17.46■□□□□ 0.39
MCF2L-203ENST00000375604 GRK4P32298 578 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 FASTKQ14296 549 aaKnown RBP17.46■□□□□ 0.39
MCF2L-203ENST00000375604 LUZP2Q86TE4 346 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 CYP4Z1Q86W10 505 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 USP7Q93009 1102 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 TBCBQ99426 244 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 BTBD7Q9P203 1132 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 PACSIN3Q9UKS6 424 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 NDUFS2O75306 463 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 OR4Q2P0C623 313 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 UMPSP11172 480 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 NFKB1P19838 968 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 SPANXN3Q5MJ09 141 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 ZNF621Q6ZSS3 439 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 CCDC103Q8IW40 242 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 PAWRQ96IZ0 340 aaKnown RBP17.46■□□□□ 0.39
MCF2L-203ENST00000375604 ZMAT2Q96NC0 199 aaKnown RBP17.46■□□□□ 0.39
MCF2L-203ENST00000375604 ABCC13Q9NSE7 274 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 PRKAG3Q9UGI9 489 aa17.46■□□□□ 0.39
MCF2L-203ENST00000375604 IQGAP1P46940 1657 aa17.46■□□□□ 0.38
MCF2L-203ENST00000375604 REREQ9P2R6 1566 aa17.46■□□□□ 0.38
MCF2L-203ENST00000375604 MEIS2O14770 477 aa17.46■□□□□ 0.38
MCF2L-203ENST00000375604 GUCA1AP43080 201 aaPredicted RBP17.46■□□□□ 0.38
MCF2L-203ENST00000375604 C1orf186Q6ZWK4 172 aa17.46■□□□□ 0.38
MCF2L-203ENST00000375604 LOC102724159A0A0B4J2E5 919 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 KDELR1P24390 212 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 HSPA14Q0VDF9 509 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 PWP2Q15269 919 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 PFKFB4Q16877 469 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 RAET1GQ6H3X3 334 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 ELMO1Q92556 727 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 CPNE1Q99829 537 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 CIDEBQ9UHD4 219 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 INPP4BO15327 924 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 GTF2E2P29084 291 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 ELAVL2Q12926 359 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 CSTF3Q12996 717 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 CXorf40AQ8TE69 158 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 SUSD6Q92537 303 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 HAS1Q92839 578 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 FRMD8Q9BZ67 464 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 ARL15Q9NXU5 204 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 SHBGP04278 402 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 FYNP06241 537 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 MAPTP10636 758 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 BRCC3P46736 316 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 SP3Q02447 781 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 SFSWAPQ12872 951 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 IDI2Q9BXS1 227 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 SCAMP1O15126 338 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 ZNF7P17097 686 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 NPY2RP49146 381 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 MAMLD1Q13495 774 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 CAPSQ13938 189 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 TRIM25Q14258 630 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 SNAP47Q5SQN1 464 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 RNF44Q7L0R7 432 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 CCNJLQ8IV13 435 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 METTL6Q8TCB7 284 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 MTMR9Q96QG7 549 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 FAM20BO75063 409 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 ATP5C1P36542 298 aaKnown RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 TAF2Q6P1X5 1199 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 MAB21L3Q8N8X9 362 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 UXS1Q8NBZ7 420 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 C18orf25Q96B23 403 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-203ENST00000375604 MPP6Q9NZW5 540 aa17.45■□□□□ 0.38
MCF2L-203ENST00000375604 ASTN1O14525 1302 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 CCL16O15467 120 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 PSMC3P17980 439 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 ABRQ12979 859 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 CRY1Q16526 586 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 USP39Q53GS9 565 aaKnown RBP17.44■□□□□ 0.38
MCF2L-203ENST00000375604 CNSTQ6PJW8 725 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 SLC22A9Q8IVM8 553 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 TADA1Q96BN2 335 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 TRAV19A0A0A6YYK7 116 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 CYP2A6P11509 494 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-203ENST00000375604 HDCP19113 662 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 ATP6V1C1P21283 382 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 AXLP30530 894 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 OAZ1P54368 228 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 PKNOX1P55347 436 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 MCL1Q07820 350 aa17.44■□□□□ 0.38
MCF2L-203ENST00000375604 ACO2Q99798 780 aaKnown RBP17.44■□□□□ 0.38
MCF2L-203ENST00000375604 TMEM79Q9BSE2 394 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms