RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 NOS2P35228 1153 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 USP4Q13107 963 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CTBP1Q13363 440 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 UBAP2LQ14157 1087 aaKnown RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 UGP2Q16851 508 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 DNAL1Q4LDG9 190 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CERCAMQ5T4B2 595 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 SNX30Q5VWJ9 437 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 SYPL2Q5VXT5 272 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 ZNF470Q6ECI4 717 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 ZNF280DQ6N043 979 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 TTC7BQ86TV6 843 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 KCNMB4Q86W47 210 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 ST13P5Q8NFI4 369 aaPredicted RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 AZIN2Q96A70 460 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CMTM5Q96DZ9 223 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CATSPERBQ9H7T0 1116 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 RABGEF1Q9UJ41 708 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 ACOT9Q9Y305 439 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 ANKRD31Q8N7Z5 1873 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 C2CD4BA6NLJ0 364 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 C9IYK1 514 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CBX4O00257 560 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CHADO15335 359 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 KLHL2O95198 593 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 METTL18O95568 372 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 F9P00740 461 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 S100BP04271 92 aaPredicted RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 ABHD2P08910 425 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 EEF1B2P24534 225 aaKnown RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 GATMP50440 423 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 GJA9P57773 515 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 PITX1P78337 314 aaPredicted RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 BTKQ06187 659 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 PDAP1Q13442 181 aaKnown RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 OLIG2Q13516 323 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CDCA2Q69YH5 1023 aaPredicted RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 HFE2Q6ZVN8 426 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 FRA10AC1Q70Z53 315 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 C16orf59Q7L2K0 433 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 UNC93AQ86WB7 457 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 NT5DC4Q86YG4 428 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CFAP52Q8N1V2 620 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 MIPOL1Q8TD10 442 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 NAF1Q96HR8 494 aaKnown RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 SERAC1Q96JX3 654 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 CATSPER2Q96P56 530 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 ZNF317Q96PQ6 595 aaPredicted RBP7.97□□□□□ -1.13
HERC4-202ENST00000373700 GCNAQ96QF7 691 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 EGFL8Q99944 293 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 BTBD10Q9BSF8 475 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 DCLRE1BQ9H816 532 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 AAASQ9NRG9 546 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 ARL8BQ9NVJ2 186 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 SYBUQ9NX95 663 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 PCDHGC3Q9UN70 934 aa7.97□□□□□ -1.13
HERC4-202ENST00000373700 IGKV6D-21A0A0A0MT36 114 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 CASQ2O14958 399 aaPredicted RBP7.96□□□□□ -1.13
HERC4-202ENST00000373700 MFSD11O43934 449 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 NOL3O60936 208 aaKnown RBP7.96□□□□□ -1.13
HERC4-202ENST00000373700 KRT36O76013 467 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 TOP3BO95985 862 aaKnown RBP7.96□□□□□ -1.13
HERC4-202ENST00000373700 STMN1P16949 149 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 CCR1P32246 355 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 CYP2C18P33260 490 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 PTPN7P35236 360 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 MATKP42679 507 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 CDK16Q00536 496 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 MAPRE1Q15691 268 aaKnown RBP7.96□□□□□ -1.13
HERC4-202ENST00000373700 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 C4orf22Q6V702 233 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 CLPTM1LQ96KA5 538 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 NAT9Q9BTE0 207 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 NMUR2Q9GZQ4 415 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 UPF3AQ9H1J1 476 aaKnown RBP7.96□□□□□ -1.13
HERC4-202ENST00000373700 CYTH4Q9UIA0 394 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 CRYL1Q9Y2S2 319 aa7.96□□□□□ -1.13
HERC4-202ENST00000373700 F8W810 466 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 GNGT2O14610 69 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 PMM2O15305 246 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 FKTNO75072 461 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 TBX18O95935 607 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 ATP6V1B1P15313 513 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 OR1D2P34982 312 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 NR2C2P49116 596 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 HARS2P49590 506 aaKnown RBP7.96□□□□□ -1.14
HERC4-202ENST00000373700 MRPS5P82675 430 aaKnown RBP7.96□□□□□ -1.14
HERC4-202ENST00000373700 SGO1Q5FBB7 561 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 RAP1GAP2Q684P5 730 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 TMCO2Q7Z6W1 182 aaPredicted RBP7.96□□□□□ -1.14
HERC4-202ENST00000373700 CACUL1Q86Y37 369 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 WDTC1Q8N5D0 677 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 TRIML2Q8N7C3 387 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 PYDC1Q8WXC3 89 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 FGD4Q96M96 766 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 EFHD1Q9BUP0 239 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 DUSP16Q9BY84 665 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 HIPK3Q9H422 1215 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 PLK2Q9NYY3 685 aa7.96□□□□□ -1.14
HERC4-202ENST00000373700 SUN2Q9UH99 717 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms