RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SF3B1O75533 1304 aaKnown RBP eCLIP24.37■■□□□ 1.498e-10■■■■■ 97.6
CDK9-201ENST00000373264 ZCWPW2A0A1B0GU75 182 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 MEI4A8MW99 385 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 SLC1A6P48664 564 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 HUNKP57058 714 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 PPIDQ08752 370 aaKnown RBP24.37■■□□□ 1.49
CDK9-201ENST00000373264 KYAT3Q6YP21 454 aaKnown RBP24.37■■□□□ 1.49
CDK9-201ENST00000373264 STRA8Q7Z7C7 330 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 DNAI2Q9GZS0 605 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 CNGB3Q9NQW8 809 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 ZNF236Q9UL36 1845 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 AP2A1O95782 977 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 JCHAINP01591 159 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 PROCP04070 461 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 CNTFP26441 200 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 PTDSS1P48651 473 aaKnown RBP24.37■■□□□ 1.49
CDK9-201ENST00000373264 RSPH3Q86UC2 560 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 LRRTM3Q86VH5 581 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 DTX3LQ8TDB6 740 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 NTAN1Q96AB6 310 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 SORT1Q99523 831 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 SIK2Q9H0K1 926 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 TXNDC16Q9P2K2 825 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 NUDT5Q9UKK9 219 aa24.37■■□□□ 1.49
CDK9-201ENST00000373264 ITGB1P05556 798 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 KCTD11Q693B1 232 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 SMC1BQ8NDV3 1235 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 RSRC1Q96IZ7 334 aaKnown RBP24.36■■□□□ 1.49
CDK9-201ENST00000373264 KATNAL1Q9BW62 490 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 CCDC106Q9BWC9 280 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 WWP1Q9H0M0 922 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 GLRA3O75311 464 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 LHX1P48742 406 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 SCAPQ12770 1279 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 TUBB3Q13509 450 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 UPP1Q16831 310 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 FSTL4Q6MZW2 842 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 ENDOVQ8N8Q3 282 aaKnown RBP24.36■■□□□ 1.49
CDK9-201ENST00000373264 SPATA22Q8NHS9 363 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 FAM167BQ9BTA0 163 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 SHCBP1LQ9BZQ2 653 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 RRAGCQ9HB90 399 aa24.36■■□□□ 1.49
CDK9-201ENST00000373264 SDAD1Q9NVU7 687 aaKnown RBP eCLIP24.36■■□□□ 1.49
CDK9-201ENST00000373264 B3GAT3O94766 335 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 FBXO21O94952 628 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 GP5P40197 560 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 GARSP41250 739 aaKnown RBP24.35■■□□□ 1.49
CDK9-201ENST00000373264 ITGA9Q13797 1035 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 NAA25Q14CX7 972 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 TRIM68Q6AZZ1 485 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 ATP2A3Q93084 1043 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 TSPAN18Q96SJ8 248 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 SLC9A7Q96T83 725 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 FERMT1Q9BQL6 677 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 INPP5FQ9Y2H2 1132 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 TRPV2Q9Y5S1 764 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 HNRNPCL1O60812 293 aaKnown RBP24.35■■□□□ 1.49
CDK9-201ENST00000373264 GNAT1P11488 350 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 NMBRP28336 390 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 CD52P31358 61 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 FKBP1BP68106 108 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 RCN1Q15293 331 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 TAF11Q15544 211 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 ANKRD20A4Q4UJ75 823 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 RWDD4Q6NW29 188 aaKnown RBP24.35■■□□□ 1.49
CDK9-201ENST00000373264 POU5F2Q8N7G0 328 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 CNTD1Q8N815 330 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.35■■□□□ 1.49
CDK9-201ENST00000373264 ZSCAN18Q8TBC5 510 aaPredicted RBP24.35■■□□□ 1.49
CDK9-201ENST00000373264 RNF34Q969K3 372 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 SLC38A7Q9NVC3 462 aa24.35■■□□□ 1.49
CDK9-201ENST00000373264 C9IYK1 514 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 M0QZ92 97 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 PGM1P36871 562 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 GJA9P57773 515 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 TAF2Q6P1X5 1199 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 OR10T2Q8NGX3 314 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 AGR3Q8TD06 166 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 SMARCD1Q96GM5 515 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 MYCBPQ99417 103 aaPredicted RBP24.34■■□□□ 1.49
CDK9-201ENST00000373264 SENP6Q9GZR1 1112 aaPredicted RBP24.34■■□□□ 1.49
CDK9-201ENST00000373264 CASS4Q9NQ75 786 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 SPANXN3Q5MJ09 141 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 NAPRTQ6XQN6 538 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 TMEM135Q86UB9 458 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 PIWIL2Q8TC59 973 aaKnown RBP24.34■■□□□ 1.49
CDK9-201ENST00000373264 ACMSDQ8TDX5 336 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 NRG4Q8WWG1 115 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 RBBP8Q99708 897 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 GBA3Q9H227 469 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 YY1AP1Q9H869 796 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 LRRC40Q9H9A6 602 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 COPG2Q9UBF2 871 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 CDH9Q9ULB4 789 aa24.34■■□□□ 1.49
CDK9-201ENST00000373264 MSI1O43347 362 aaKnown RBP24.33■■□□□ 1.49
CDK9-201ENST00000373264 SAT1P21673 171 aa24.33■■□□□ 1.49
CDK9-201ENST00000373264 CXCR3P49682 368 aa24.33■■□□□ 1.49
CDK9-201ENST00000373264 GALNT2Q10471 571 aa24.33■■□□□ 1.49
CDK9-201ENST00000373264 FAM161BQ96MY7 647 aa24.33■■□□□ 1.49
CDK9-201ENST00000373264 BFARQ9NZS9 450 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms