RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 SPDYCQ5MJ68 293 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 RASAL3Q86YV0 1011 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 PHF20Q9BVI0 1012 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 GIN1Q9NXP7 522 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 VANGL2Q9ULK5 521 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 CASKO14936 926 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 ATP5BP06576 529 aaKnown RBP15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 EIF4A1P60842 406 aaKnown RBP15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 GALNT3Q14435 633 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 TRIM2Q9C040 744 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 CYP3A43Q9HB55 503 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 ADGRL2O95490 1459 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 TRIP11Q15643 1979 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 MAP3K6O95382 1288 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 ZMYND11Q15326 602 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 ZNF75CPQ92670 426 aaPredicted RBP15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 TRNT1Q96Q11 434 aaKnown RBP15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 AIF1LQ9BQI0 150 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 TMEM121Q9BTD3 319 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 FICDQ9BVA6 458 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 TMEM260Q9NX78 707 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 ASB14A6NK59 587 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 TP73O15350 636 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 TKTP29401 623 aaKnown RBP15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 MTAPQ13126 283 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 PIH1D2Q8WWB5 315 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 GPAMQ9HCL2 828 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 EXD2Q9NVH0 621 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 MED11Q9P086 117 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 NAALADL1Q9UQQ1 740 aa15.57■□□□□ 0.08
GTF3C4-201ENST00000372146 LRRC14BA6NHZ5 514 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 MID1O15344 667 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 ACOT2P49753 483 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 MYBPC1Q00872 1141 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 NECTIN1Q15223 517 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 RNF220Q5VTB9 566 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 SWSAP1Q6NVH7 229 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 CST11Q9H112 138 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 CCDC86Q9H6F5 360 aaKnown RBP15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.56■□□□□ 0.083e-6■■■■□ 22.4
GTF3C4-201ENST00000372146 ARHGAP28Q9P2N2 729 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 TRAPPC3O43617 180 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 BMP10O95393 424 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 PAX3P23760 479 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 XDHP47989 1333 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 PSME3P61289 254 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 NKX1-1Q15270 411 aaPredicted RBP15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 LCN1P1Q5VSP4 162 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 YAF2Q8IY57 180 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 OR52K2Q8NGK3 314 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 FEZF2Q8TBJ5 459 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 DCAF4Q8WV16 495 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 CLPBQ9H078 707 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 MID1IP1Q9NPA3 183 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 PRDM4Q9UKN5 801 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 AAR2Q9Y312 384 aaKnown RBP15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 NT5C2P49902 561 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 INO80EQ8NBZ0 244 aaPredicted RBP15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 LY9Q9HBG7 655 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 CCR4P51679 360 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 GOLGA7BQ2TAP0 167 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 HDDC3Q8N4P3 179 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 TBC1D22BQ9NU19 505 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 PDXKO00764 312 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 KCNJ2P63252 427 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 RPP38P78345 283 aaKnown RBP15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 PLD1Q13393 1074 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 AP4E1Q9UPM8 1137 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 VPS4BO75351 444 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 SCNN1BP51168 640 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 PRKAA1Q13131 559 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 ZNF234Q14588 700 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 HAUS6Q7Z4H7 955 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 APOPT1Q96IL0 206 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 ZFYVE28Q9HCC9 887 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 HOXC10Q9NYD6 342 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 PI4KBQ9UBF8 816 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 MATN2O00339 956 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 NR3C2P08235 984 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 HALP42357 657 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 TNK2Q07912 1038 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 NT5DC3Q86UY8 548 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 ZMYM5Q9UJ78 669 aa15.56■□□□□ 0.08
GTF3C4-201ENST00000372146 CCNE2O96020 404 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 GJA1P17302 382 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 DPYDQ12882 1025 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 VPS35Q96QK1 796 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 PLEKHF1Q96S99 279 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 PSKH1P11801 424 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 ZSWIM1Q9BR11 485 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 PRKD2Q9BZL6 878 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 CHIAQ9BZP6 476 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 ABCB9Q9NP78 766 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 VPS45Q9NRW7 570 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 SPAG4Q9NPE6 437 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 CAMTA2O94983 1202 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 MYCP01106 439 aaPredicted RBP15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 IFNA7P01567 189 aa15.55■□□□□ 0.08
GTF3C4-201ENST00000372146 HIST1H2ABP04908 130 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms