RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CFAP47Q6ZTR5 3102 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 LRRC53A6NM62 1247 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 SIGLEC16A6NMB1 481 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 SLC30A4O14863 429 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 TM4SF5O14894 197 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 MAP3K13O43283 966 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 AP5Z1O43299 807 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 CNTN5O94779 1100 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 CALB1P05937 261 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 CCDC172P0C7W6 258 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 PDGFRAP16234 1089 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 RFC1P35251 1148 aaPredicted RBP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 CDH4P55283 916 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 OXCT1P55809 520 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 FANCCQ00597 558 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 ECT2LQ008S8 904 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 RPL6Q02878 288 aaKnown RBP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 SKOR2Q2VWA4 1001 aaPredicted RBP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 ALFQ53S48 1182 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 SH3PXD2AQ5TCZ1 1133 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 TCEAL6Q6IPX3 200 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 ACAD10Q6JQN1 1059 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 SND1Q7KZF4 910 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 STRADAQ7RTN6 431 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 CYP2U1Q7Z449 544 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 PHLDB2Q86SQ0 1253 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 CCDC117Q8IWD4 279 aaPredicted RBP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 PRCCQ92733 491 aaPredicted RBP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 TCEAL3Q969E4 200 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 FEM1AQ9BSK4 669 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 SIK2Q9H0K1 926 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 RSPH9Q9H1X1 276 aaPredicted RBP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 MTG2Q9H4K7 406 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 EVLQ9UI08 416 aaPredicted RBP21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 SLCO3A1Q9UIG8 710 aa21.15■□□□□ 0.98
SMNDC1-201ENST00000369592 PCDH15Q96QU1 1955 aa21.14■□□□□ 0.98
SMNDC1-201ENST00000369592 MOCS3O95396 460 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 KRT3P12035 628 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 CD6P30203 668 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 HOXD12P35452 270 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 HDAC4P56524 1084 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 RPS14P62263 151 aaKnown RBP21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 NRG1Q02297 640 aaPredicted RBP21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 ZBTB16Q05516 673 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 C15orf59Q2T9L4 293 aaPredicted RBP21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 C9orf64Q5T6V5 341 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 MANEALQ5VSG8 457 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 LYSMD4Q5XG99 296 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 WDR59Q6PJI9 974 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM131BQ86XD5 332 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 SYT12Q8IV01 421 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 MCOLN2Q8IZK6 566 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 TAS2R14Q9NYV8 317 aa21.14■□□□□ 0.97
SMNDC1-201ENST00000369592 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 TARSL2A2RTX5 802 aaKnown RBP21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 DCDC2BA2VCK2 349 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 PATE3B3GLJ2 98 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 C10orf142B7Z368 130 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 SERPINC1P01008 464 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 ITPKAP23677 461 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 ADRA1BP35368 520 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 ATP11AP98196 1134 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 SULT2A1Q06520 285 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 ZNF33AQ06730 810 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 ZNF177Q13360 481 aaPredicted RBP21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 ZNF571Q7Z3V5 609 aaPredicted RBP21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 FRS2Q8WU20 508 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 PIGKQ92643 395 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 TOE1Q96GM8 510 aaKnown RBP21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 VCPIP1Q96JH7 1222 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 FAM129BQ96TA1 746 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 RTKNQ9BST9 563 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 NEU3Q9UQ49 428 aa21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 ASCC3Q8N3C0 2202 aaKnown RBP21.13■□□□□ 0.97
SMNDC1-201ENST00000369592 LNP1A1A4G5 178 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 TTC34A8MYJ7 566 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 E9PAM4 449 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 SIN3BO75182 1162 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 OXTRP30559 389 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 SDC4P31431 198 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 DPP6P42658 865 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 STK19P49842 368 aaPredicted RBP21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 ARMCX6Q7L4S7 300 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 SETD3Q86TU7 594 aaPredicted RBP21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 DEFB119Q8N690 84 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 CADM4Q8NFZ8 388 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 DNASE2BQ8WZ79 361 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 PTPRN2Q92932 1015 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 PSMB7Q99436 277 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 OSBPL2Q9H1P3 480 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 HAUS4Q9H6D7 363 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 PPARGC1AQ9UBK2 798 aaKnown RBP21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 KNL1Q8NG31 2342 aa21.12■□□□□ 0.97
SMNDC1-201ENST00000369592 A0A1W2PQJ5 194 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 ATP9BO43861 1147 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 GZMAP12544 262 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 RRM1P23921 792 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 ST8SIA6P61647 398 aa21.11■□□□□ 0.97
SMNDC1-201ENST00000369592 RPL7AP62424 266 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms