RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 CALB1P05937 261 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 RFC1P35251 1148 aaPredicted RBP19.51■□□□□ 0.71
CKS1B-203ENST00000368439 PBX1P40424 430 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 PTPN9P43378 593 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 CDH4P55283 916 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 RPS14P62263 151 aaKnown RBP19.51■□□□□ 0.71
CKS1B-203ENST00000368439 ATP11AP98196 1134 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 C9orf64Q5T6V5 341 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 FAM131BQ86XD5 332 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 CACUL1Q86Y37 369 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 C3orf20Q8ND61 904 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 TOE1Q96GM8 510 aaKnown RBP19.51■□□□□ 0.71
CKS1B-203ENST00000368439 HAPLN3Q96S86 360 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 FEM1AQ9BSK4 669 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 RSPH9Q9H1X1 276 aaPredicted RBP19.51■□□□□ 0.71
CKS1B-203ENST00000368439 AIPL1Q9NZN9 384 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 EVLQ9UI08 416 aaPredicted RBP19.51■□□□□ 0.71
CKS1B-203ENST00000368439 PCDH15Q96QU1 1955 aa19.51■□□□□ 0.71
CKS1B-203ENST00000368439 ATXN2Q99700 1313 aaKnown RBP19.51■□□□□ 0.71
CKS1B-203ENST00000368439 CHD5Q8TDI0 1954 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 LNP1A1A4G5 178 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 TTC34A8MYJ7 566 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 SIN3BO75182 1162 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 SERPINC1P01008 464 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 CCDC172P0C7W6 258 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 KRT3P12035 628 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 NUMBP49757 651 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 STK19P49842 368 aaPredicted RBP19.5■□□□□ 0.71
CKS1B-203ENST00000368439 OXCT1P55809 520 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 ST8SIA6P61647 398 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 FANCCQ00597 558 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 C1QBPQ07021 282 aaKnown RBP19.5■□□□□ 0.71
CKS1B-203ENST00000368439 PPP1R15BQ5SWA1 713 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 ACBD5Q5T8D3 534 aaPredicted RBP19.5■□□□□ 0.71
CKS1B-203ENST00000368439 ACAD10Q6JQN1 1059 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 ERMP1Q7Z2K6 904 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 DGLUCYQ7Z3D6 616 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 RPL10LQ96L21 214 aaKnown RBP19.5■□□□□ 0.71
CKS1B-203ENST00000368439 SEPT11Q9NVA2 429 aaKnown RBP19.5■□□□□ 0.71
CKS1B-203ENST00000368439 TAS2R14Q9NYV8 317 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 ZNF212Q9UDV6 495 aa19.5■□□□□ 0.71
CKS1B-203ENST00000368439 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.49■□□□□ 0.71
CKS1B-203ENST00000368439 SIGLEC16A6NMB1 481 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 E9PAM4 449 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 TM4SF5O14894 197 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 KHNYNO15037 678 aaKnown RBP19.49■□□□□ 0.71
CKS1B-203ENST00000368439 NDUFS2O75306 463 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 ACADMP11310 421 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 OXTRP30559 389 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 SDC4P31431 198 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 HOXD12P35452 270 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 PRKCIP41743 596 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 DPP6P42658 865 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 VASPP50552 380 aaPredicted RBP19.49■□□□□ 0.71
CKS1B-203ENST00000368439 IRX4P78413 519 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 ZBTB16Q05516 673 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 ZNF177Q13360 481 aaPredicted RBP19.49■□□□□ 0.71
CKS1B-203ENST00000368439 CDO1Q16878 200 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 FIGNQ5HY92 759 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 STPG1Q5TH74 334 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 SLC23A3Q6PIS1 610 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 WDR59Q6PJI9 974 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 STRADAQ7RTN6 431 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 MCOLN2Q8IZK6 566 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 PTPRN2Q92932 1015 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 HSPA12BQ96MM6 686 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 EDEM3Q9BZQ6 932 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 MPP6Q9NZW5 540 aa19.49■□□□□ 0.71
CKS1B-203ENST00000368439 TARSL2A2RTX5 802 aaKnown RBP19.48■□□□□ 0.71
CKS1B-203ENST00000368439 ADRA1BP35368 520 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 HDAC4P56524 1084 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 SULT2A1Q06520 285 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 SKOR2Q2VWA4 1001 aaPredicted RBP19.48■□□□□ 0.71
CKS1B-203ENST00000368439 TRIM61Q5EBN2 209 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 ZNF571Q7Z3V5 609 aaPredicted RBP19.48■□□□□ 0.71
CKS1B-203ENST00000368439 CADM4Q8NFZ8 388 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 FRS2Q8WU20 508 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 FAM129BQ96TA1 746 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 PSMB7Q99436 277 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 EDEM2Q9BV94 578 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 NUP58Q9BVL2 599 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 SELENOOQ9BVL4 669 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 GPR174Q9BXC1 333 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 MAGEB5Q9BZ81 275 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 HAUS4Q9H6D7 363 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 CACNA1EQ15878 2313 aa19.48■□□□□ 0.71
CKS1B-203ENST00000368439 EDDM13A0A1B0GTR0 161 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 DCDC2BA2VCK2 349 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 CDX4O14627 284 aaPredicted RBP19.47■□□□□ 0.71
CKS1B-203ENST00000368439 TNFAIP3P21580 790 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 GPD1P21695 349 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 RRM1P23921 792 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 RPL7AP62424 266 aaKnown RBP19.47■□□□□ 0.71
CKS1B-203ENST00000368439 NRG1Q02297 640 aaPredicted RBP19.47■□□□□ 0.71
CKS1B-203ENST00000368439 ASIC2Q16515 512 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 MANEALQ5VSG8 457 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 SFMBT2Q5VUG0 894 aa19.47■□□□□ 0.71
CKS1B-203ENST00000368439 RNF219Q5W0B1 726 aaPredicted RBP19.47■□□□□ 0.71
CKS1B-203ENST00000368439 ZNF776Q68DI1 518 aaPredicted RBP19.47■□□□□ 0.71
CKS1B-203ENST00000368439 LRRC31Q6UY01 552 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms