RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 RALGPS2Q86X27 583 aaPredicted RBP13.4□□□□□ -0.26
NCSTN-202ENST00000368063 HERC6Q8IVU3 1022 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 ACTL9Q8TC94 416 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 MAPK15Q8TD08 544 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 RAB2BQ8WUD1 216 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 ACSF2Q96CM8 615 aaPredicted RBP13.4□□□□□ -0.26
NCSTN-202ENST00000368063 ASB9Q96DX5 294 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 OR52B2Q96RD2 323 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 EIF2AK1Q9BQI3 630 aaKnown RBP13.4□□□□□ -0.26
NCSTN-202ENST00000368063 C11orf70Q9BRQ4 267 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 ADI1Q9BV57 179 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 B3GNT4Q9C0J1 378 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 NOL11Q9H8H0 719 aaKnown RBP13.4□□□□□ -0.26
NCSTN-202ENST00000368063 HOMER2Q9NSB8 354 aa13.4□□□□□ -0.26
NCSTN-202ENST00000368063 CNOT6Q9ULM6 557 aaKnown RBP13.4□□□□□ -0.26
NCSTN-202ENST00000368063 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TRIM38O00635 465 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 AURKAO14965 403 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TBX3O15119 743 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 SEC24DO94855 1032 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 IFNA8P32881 189 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 POLR2IP36954 125 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ABCE1P61221 599 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PRKCQQ04759 706 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CBLBQ13191 982 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CDONQ4KMG0 1287 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PRR16Q569H4 304 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CEP78Q5JTW2 689 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 MROH9Q5TGP6 573 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 USP17L6PQ6QN14 398 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PARP8Q8N3A8 854 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ANGPTL6Q8NI99 470 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CRYGNQ8WXF5 182 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ELMO3Q96BJ8 720 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 DUS3LQ96G46 650 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CBWD1Q9BRT8 395 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ANGPTL3Q9Y5C1 460 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ZSCAN5BA6NJL1 495 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 AVILO75366 819 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TCN1P20061 433 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PTPN9P43378 593 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 LEPRP48357 1165 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CDK8P49336 464 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 RAD23AP54725 363 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 RHBDL3P58872 404 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CTAG1AP78358 180 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 IQSEC1Q6DN90 963 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 UNC45BQ8IWX7 931 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 NATD1Q8N6N6 113 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 LSMEM1Q8N8F7 131 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 GABPB2Q8TAK5 448 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CELF1Q92879 486 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 GLT1D1Q96MS3 346 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 MRPL47Q9HD33 250 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 HACD3Q9P035 362 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TBKBP1A7MCY6 615 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ACOX3O15254 700 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PLIN3O60664 434 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 LDHBP07195 334 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 KRT5P13647 590 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PRKAA2P54646 552 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CDC20Q12834 499 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 SLC36A3Q495N2 470 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ODR4Q5SWX8 454 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 LRRC38Q5VT99 294 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 KRT39Q6A163 491 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 INTS5Q6P9B9 1019 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TMC5Q6UXY8 1006 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TIFABQ6ZNK6 161 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CYP4V2Q6ZWL3 525 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 FBXO33Q7Z6M2 555 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 C10orf107Q8IVU9 208 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ADGRF4Q8IZF3 695 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 MFSD4AQ8N468 514 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 TMEM174Q8WUU8 243 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 SNX19Q92543 992 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 PDZD7Q9H5P4 517 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 POPDC2Q9HBU9 364 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 SUCOQ9UBS9 1254 aaKnown RBP13.39□□□□□ -0.27
NCSTN-202ENST00000368063 ENPP5Q9UJA9 477 aa13.39□□□□□ -0.27
NCSTN-202ENST00000368063 SCN4AP35499 1836 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms