RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 B4GALT4O60513 344 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 KATNA1O75449 491 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 CPSF4O95639 269 aaKnown RBP16.82■□□□□ 0.28
SCAF8-201ENST00000367178 SLC2A4P14672 509 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 POLR2EP19388 210 aaKnown RBP16.82■□□□□ 0.28
SCAF8-201ENST00000367178 MATKP42679 507 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 MMRN1Q13201 1228 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 USP41Q3LFD5 358 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 TJAP1Q5JTD0 557 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 FAM35AQ86V20 835 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 TMEM199Q8N511 208 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 MCOLN3Q8TDD5 553 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.282e-13■■■■□ 20.3
SCAF8-201ENST00000367178 CRYL1Q9Y2S2 319 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 FGFR1P11362 822 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 ACOX1Q15067 660 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 CCDC85BQ15834 202 aaPredicted RBP16.82■□□□□ 0.28
SCAF8-201ENST00000367178 PCID2Q5JVF3 399 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 ALLCQ8N6M5 410 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 ZBTB10Q96DT7 871 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 SYT17Q9BSW7 474 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 ZYG11BQ9C0D3 744 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 MID1IP1Q9NPA3 183 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 CNGB3Q9NQW8 809 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 BATF3Q9NR55 127 aa16.82■□□□□ 0.28
SCAF8-201ENST00000367178 ZNF23P17027 643 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 ADRA1DP25100 572 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 PTPN4P29074 926 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 BRCC3P46736 316 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 RFX3P48380 749 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 TUSC3Q13454 348 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 TMEM154Q6P9G4 183 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 CACUL1Q86Y37 369 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 KREMEN1Q96MU8 473 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 TSPAN18Q96SJ8 248 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 VTI1BQ9UEU0 232 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 SLC27A5Q9Y2P5 690 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 DERAQ9Y315 318 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 SNX13Q9Y5W8 968 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 BTN3A1O00481 513 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 PHGDHO43175 533 aaKnown RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 NFKB1P19838 968 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 MRPS5P82675 430 aaKnown RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 CENPLQ8N0S6 344 aaPredicted RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 CATSPER2Q96P56 530 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 CCT7Q99832 543 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 NFKBIZQ9BYH8 718 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 IGFLR1Q9H665 355 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 TUBGCP4Q9UGJ1 667 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 hCG_1818297A0A087WSY0 165 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 GOT1P17174 413 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 ERCC2P18074 760 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 FMO4P31512 558 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 HSPA13P48723 471 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 PLK1P53350 603 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 DYNC1I2Q13409 638 aaKnown RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 METTL6Q8TCB7 284 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 BSNDQ8WZ55 320 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 MED8Q96G25 268 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 IMPAD1Q9NX62 359 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 A8MX80 341 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 EFCAB14O75071 495 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 UBTFL6P0CB48 400 aaPredicted RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 CCNB1P14635 433 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 CD86P42081 329 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 FNDC3BQ53EP0 1204 aaKnown RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 C9orf57Q5W0N0 161 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 KYAT3Q6YP21 454 aaKnown RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 DIS3LQ8TF46 1054 aaKnown RBP16.81■□□□□ 0.28
SCAF8-201ENST00000367178 DUSP16Q9BY84 665 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 COL20A1Q9P218 1284 aa16.81■□□□□ 0.28
SCAF8-201ENST00000367178 FCHO1O14526 889 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ABCG1P45844 678 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 EIF2B5Q13144 721 aaKnown RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ITGA7Q13683 1181 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 MFSD4BQ5TF39 518 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 MIER2Q8N344 545 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 SERAC1Q96JX3 654 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 MRPL45Q9BRJ2 306 aaKnown RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 DPY30Q9C005 99 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 EXOSC4Q9NPD3 245 aaKnown RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 DDX20Q9UHI6 824 aaKnown RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 TRAV19A0A0A6YYK7 116 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 SLC9A3R1O14745 358 aaPredicted RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 XPO1O14980 1071 aaKnown RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ITGAVP06756 1048 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 CRADDP78560 199 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 PREPLQ4J6C6 727 aaPredicted RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 SDHAF4Q5VUM1 108 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 OR56A4Q8NGH8 313 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ZNF75CPQ92670 426 aaPredicted RBP16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ASAH2Q9NR71 780 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 CACNA2D2Q9NY47 1150 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 BTBD7Q9P203 1132 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ARHGAP28Q9P2N2 729 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 SASH3O75995 380 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 CHKAP35790 457 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 TAS2R40P59535 323 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 ZCCHC23Q6ZST2 131 aa16.8■□□□□ 0.28
SCAF8-201ENST00000367178 USP45Q70EL2 814 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms