RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 URADA6NGE7 173 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 F8VZ95 297 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 NAB1Q13506 487 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 CNGA2Q16280 664 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PALB2Q86YC2 1186 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 RTL3Q8N8U3 475 aaKnown RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 NKX2-3Q8TAU0 364 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 POPDC2Q9HBU9 364 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 ARL15Q9NXU5 204 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 DLGAP2Q9P1A6 1054 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 E7ENQ6 273 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PDE2AO00408 941 aaPredicted RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 CSDE1O75534 798 aaKnown RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 KLHL18O94889 574 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 TSPAN19P0C672 248 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 MYBL2P10244 700 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 SLC1A6P48664 564 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 CXCL9Q07325 125 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 BMPR2Q13873 1038 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 NAA30Q147X3 362 aaPredicted RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PDZK1Q5T2W1 519 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 ZNF470Q6ECI4 717 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 NEK5Q6P3R8 708 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 C2orf49Q9BVC5 232 aaPredicted RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 NDUFA13Q9P0J0 144 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 CROTQ9UKG9 612 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 TMCO1Q9UM00 188 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 AP3M1Q9Y2T2 418 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 SGTAO43765 313 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PARNO95453 639 aaKnown RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 PAEPP09466 180 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 ATP5C1P36542 298 aaKnown RBP15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 KDM7AQ6ZMT4 941 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 LRRC74BQ6ZQY2 392 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 SLC39A8Q9C0K1 460 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 ZNF232Q9UNY5 417 aa15.99■□□□□ 0.15
NUCKS1-201ENST00000367142 N4BP2L1Q5TBK1 243 aaPredicted RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 USP50Q70EL3 339 aaPredicted RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 RERGQ96A58 199 aaPredicted RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 VAT1Q99536 393 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 POLR1BQ9H9Y6 1135 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 TCF7L2Q9NQB0 619 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 CATSPERZQ9NTU4 200 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 MAPRE3Q9UPY8 281 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 EPN2O95208 641 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 YBX3P16989 372 aaKnown RBP eCLIP15.98■□□□□ 0.152e-7■■■■□ 24.3
NUCKS1-201ENST00000367142 ACSM2AQ08AH3 577 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 RASA2Q15283 850 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 ACSM2BQ68CK6 577 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 GPC2Q8N158 579 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 HTATIP2Q9BUP3 242 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 ATAD3AQ9NVI7 634 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 HAO1Q9UJM8 370 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 LRRC7Q96NW7 1537 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 BIRC5O15392 142 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 OR6B1O95007 311 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 ANXA6P08133 673 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 ZNF57Q68EA5 555 aaPredicted RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 SIX5Q8N196 739 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 KYQ8NBH2 561 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 SLC2A14Q8TDB8 520 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 BTBD9Q96Q07 612 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 SEPHS2Q99611 448 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 ADAM2Q99965 735 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 GNPTGQ9UJJ9 305 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 DNPEPQ9ULA0 475 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 TMEM191CA6NGB0 347 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 LACTBL1A8MY62 500 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 KIF1CO43896 1103 aaKnown RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 HTR1BP28222 390 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 MAPK8P45983 427 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 SERPINH1P50454 418 aaKnown RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 SLC44A4Q53GD3 710 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 SCARA3Q6AZY7 606 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 R3HCC1LQ7Z5L2 792 aaKnown RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 KIFC1Q9BW19 673 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 PRDM16Q9HAZ2 1276 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 TRIM43BA6NCK2 446 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 MOXD2PA6NHM9 499 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 KPNA5O15131 536 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 CD3EAPO15446 510 aaKnown RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 MGAT1P26572 445 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 S100A3P33764 101 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 SLC6A3Q01959 620 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 PPATQ06203 517 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 OASLQ15646 514 aaKnown RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 DEFB106AQ8N104 65 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 FIBCD1Q8N539 461 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 ACTRT1Q8TDG2 376 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 ELMO1Q92556 727 aa15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 CDC42EP4Q9H3Q1 356 aaKnown RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 TNPO3Q9Y5L0 923 aaKnown RBP15.98■□□□□ 0.15
NUCKS1-201ENST00000367142 FGF10O15520 208 aaPredicted RBP15.97■□□□□ 0.15
NUCKS1-201ENST00000367142 SERPINE1P05121 402 aa15.97■□□□□ 0.15
NUCKS1-201ENST00000367142 FAM228BP0C875 321 aa15.97■□□□□ 0.15
NUCKS1-201ENST00000367142 ZCWPW2Q504Y3 356 aa15.97■□□□□ 0.15
NUCKS1-201ENST00000367142 SH3BP5LQ7L8J4 393 aa15.97■□□□□ 0.15
NUCKS1-201ENST00000367142 APLFQ8IW19 511 aaPredicted RBP15.97■□□□□ 0.15
NUCKS1-201ENST00000367142 FAM126BQ8IXS8 530 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms