RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 E5RJQ4 531 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 SERPINF2P08697 491 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 CETPP11597 493 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 SLC11A2P49281 568 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 NEK3P51956 506 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 CYP51A1Q16850 503 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 RNASEH2BQ5TBB1 312 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 EID3Q8N140 333 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 FAM81AQ8TBF8 368 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 WNT8BQ93098 351 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 NEUROG2Q9H2A3 272 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 B4GALT4O60513 344 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 NOS2P35228 1153 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 RAB27AP51159 221 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 RAP1GDS1P52306 607 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 STARD8Q92502 1023 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 TAS2R13Q9NYV9 303 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ACO1P21399 889 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 MAST2Q6P0Q8 1798 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 SIPA1L3O60292 1781 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 PIGNO95427 931 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 COL6A2P12110 1019 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 GMPSP49915 693 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ATXN3P54252 364 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ABRAXAS1Q6UWZ7 409 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 BLOC1S5Q8TDH9 187 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 DNAJC28Q9NX36 388 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 BCLAF3A2AJT9 711 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 RECQL5O94762 991 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ASMTLO95671 621 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 KRT6AP02538 564 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 KRT6BP04259 564 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 KRT6CP48668 564 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 SFSWAPQ12872 951 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 TOP3AQ13472 1001 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 PQLC1Q8N2U9 271 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 HELQQ8TDG4 1101 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 FICDQ9BVA6 458 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 PRRG3Q9BZD7 231 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 FBXO6Q9NRD1 293 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 IGKV6D-41A0A0C4DH26 115 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 INPP4BO15327 924 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ST13P50502 369 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 TKTL1P51854 596 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 CCNG1P51959 295 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 C21orf59P57076 290 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 RPL26P61254 145 aaKnown RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 CDK18Q07002 472 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 STK40Q8N2I9 435 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 KAT2BQ92831 832 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 GRIP2Q9C0E4 1043 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 LZTS1Q9Y250 596 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 COQ4Q9Y3A0 265 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 LRP6O75581 1613 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 BBIP1A8MTZ0 92 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 SPATA31C2B4DYI2 1134 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 FESP07332 822 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ETS1P14921 441 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 PPIL2Q13356 520 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 TIMM50Q3ZCQ8 353 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 OR56A4Q8NGH8 313 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 RORBQ92753 470 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 CABYRO75952 493 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ITGB5P18084 799 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 AVPR1AP37288 418 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 PCID2Q5JVF3 399 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 TTC23Q5W5X9 447 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 NEPROQ6NW34 567 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 CASP10Q92851 521 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZNF512Q96ME7 567 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 PCDHGC3Q9UN70 934 aa12.01□□□□□ -0.49
CDC42BPA-202ENST00000366764 EIF2S1P05198 315 aaKnown RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 THP07101 528 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CLCN5P51795 746 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 TAS2R40P59535 323 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 RFX4Q33E94 735 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 MARC1Q5VT66 337 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 ZDHHC13Q8IUH4 622 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 SCUBE3Q8IX30 993 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 FBXO39Q8N4B4 442 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 SNX31Q8N9S9 440 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 SERPINB11Q96P15 392 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 EBF2Q9HAK2 575 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 BAIAP3O94812 1187 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CHRM3P20309 590 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 PIK3R1P27986 724 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 SFRP1Q8N474 314 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 NIPA2Q8N8Q9 360 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 PHGDHO43175 533 aaKnown RBP12□□□□□ -0.49
CDC42BPA-202ENST00000366764 KPNA6O60684 536 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 PLPPR4Q7Z2D5 763 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CCDC103Q8IW40 242 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 MUC3BQ9H195 1237 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 PLGRKTQ9HBL7 147 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 TRIM38O00635 465 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 CSHL1Q14406 222 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 POU6F1Q14863 301 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 GALNTL6Q49A17 601 aa12□□□□□ -0.49
CDC42BPA-202ENST00000366764 IL31Q6EBC2 164 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms