RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TTC17Q96AE7 1141 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 FAM131CQ96AQ9 280 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 ARRDC3Q96B67 414 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 NOX5Q96PH1 765 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 MYOCQ99972 504 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 OMDQ99983 421 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 EPN3Q9H201 632 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 SUN2Q9UH99 717 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 SLCO3A1Q9UIG8 710 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 STOML2Q9UJZ1 356 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 SCML1Q9UN30 329 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 PAXBP1Q9Y5B6 917 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 PCDHGA8Q9Y5G5 932 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 DOPEY1Q5JWR5 2465 aa8.82□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3DA0A087WVF3 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3IA0A087WXS9 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3EA0A087X179 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3KA0A087X1G2 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 BLACEA4D250 179 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3FA6NER0 549 aaPredicted RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 LRRIQ3A6PVS8 624 aaPredicted RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3LB9A6J9 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 K7ESM1 405 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 MSI1O43347 362 aaKnown RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 PIAS2O75928 621 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TNFSF15O95150 251 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 GP1BAP07359 652 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3HP0C7X1 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 RALAP11233 206 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 POLR2EP19388 210 aaKnown RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 GJB2P29033 226 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 RBMS1P29558 406 aaKnown RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 CSKP41240 450 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 NUMBP49757 651 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 DUSP3P51452 185 aaPredicted RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 ASIC1P78348 528 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 DLG4P78352 724 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 NCOA4Q13772 614 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 ARID5BQ14865 1188 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 E2F5Q15329 346 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 SKIDA1Q1XH10 827 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TUSC1Q2TAM9 212 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 ZNF542PQ5EBM4 170 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 FSCBQ5H9T9 825 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 ZNF667Q5HYK9 610 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 PERM1Q5SV97 790 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3GQ6DHY5 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3CQ6IPX1 549 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 GUSBP11Q6P575 273 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 FOXR1Q6PIV2 292 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 LYPD8Q6UX82 237 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 SV2BQ7L1I2 683 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 IQCHQ86VS3 1027 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 PTRH1Q86Y79 214 aaKnown RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TBC1D3Q8IZP1 549 aaPredicted RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TMEM145Q8NBT3 493 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 SGF29Q96ES7 293 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TMA16Q96EY4 203 aaKnown RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 CYFIP2Q96F07 1278 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 MRGPRX2Q96LB1 330 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 PRICKLE1Q96MT3 831 aaPredicted RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 CLIC6Q96NY7 704 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 SEMA3CQ99985 751 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 FUCA2Q9BTY2 467 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 PANK2Q9BZ23 570 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 PNPLA8Q9NP80 782 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 STK17AQ9UEE5 414 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 SFMBT1Q9UHJ3 866 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 SARDHQ9UL12 918 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 SPTBN1Q01082 2364 aaKnown RBP8.81□□□□□ -1
HMGB1P39-201ENST00000366304 KIF26BQ2KJY2 2108 aa8.81□□□□□ -1
HMGB1P39-201ENST00000366304 TTC24A2A3L6 582 aaPredicted RBP8.8□□□□□ -1
HMGB1P39-201ENST00000366304 TULP2O00295 520 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 PHACTR2O75167 634 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 ITGB2P05107 769 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 ATP5BP06576 529 aaKnown RBP8.8□□□□□ -1
HMGB1P39-201ENST00000366304 PRLRP16471 622 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 STK19P49842 368 aaPredicted RBP8.8□□□□□ -1
HMGB1P39-201ENST00000366304 TAS2R38P59533 333 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 YWHAGP61981 247 aaKnown RBP eCLIP8.8□□□□□ -1
HMGB1P39-201ENST00000366304 CLDN10P78369 228 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 KCNMA1Q12791 1236 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 SERINC3Q13530 473 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 CDKN3Q16667 212 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 SLC45A4Q5BKX6 768 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 FAM133BQ5BKY9 247 aaKnown RBP8.8□□□□□ -1
HMGB1P39-201ENST00000366304 RAB41Q5JT25 222 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 C1orf220Q5T0J3 134 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 PPP1R26Q5T8A7 1209 aaPredicted RBP8.8□□□□□ -1
HMGB1P39-201ENST00000366304 RRAGBQ5VZM2 374 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 NADSYN1Q6IA69 706 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 USP53Q70EK8 1073 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 SND1Q7KZF4 910 aaKnown RBP eCLIP8.8□□□□□ -1
HMGB1P39-201ENST00000366304 VASH2Q86V25 355 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 SLC22A18ASQ8N1D0 253 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 OR13H1Q8NG92 308 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 ZNF507Q8TCN5 953 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 KLK6Q92876 244 aa8.8□□□□□ -1
HMGB1P39-201ENST00000366304 PTPRN2Q92932 1015 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms