RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 KRT12Q99456 494 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 CNPY3Q9BT09 278 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 GTPBP2Q9BX10 602 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 AP1M1Q9BXS5 423 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 B3GNT5Q9BYG0 378 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 CRTAC1Q9NQ79 661 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ASNSD1Q9NWL6 643 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 DDX56Q9NY93 547 aaKnown RBP11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 PILRBQ9UKJ0 227 aa11.65□□□□□ -0.54
CSNK1E-202ENST00000366216 ATXN2Q99700 1313 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 OR6C75A6NL08 312 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PAPSS1O43252 624 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 ERLIN1O75477 346 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 GABBR2O75899 941 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 C1QL1O75973 258 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 ZRANB2O95218 330 aaKnown RBP eCLIP11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 KRT7P08729 469 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 FAM200BP0CF97 657 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 GPD1P21695 349 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PTPN7P35236 360 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 HOXD12P35452 270 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PCK1P35558 622 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 AVPR1AP37288 418 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 CETN2P41208 172 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 DPP6P42658 865 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PTGER3P43115 390 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 COPS2P61201 443 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 VSNL1P62760 191 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PDGFRLQ15198 375 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 MAPRE1Q15691 268 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 CYP1B1Q16678 543 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 AADACL2Q6P093 401 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC26A9Q7LBE3 791 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PIGZQ86VD9 579 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 SFTPA1Q8IWL2 248 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 CPA6Q8N4T0 437 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 CCDC26Q8TAB7 109 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PCED1BQ96HM7 432 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 RBM41Q96IZ5 413 aaKnown RBP11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 RUNDC3BQ96NL0 473 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 UBL7Q96S82 380 aaPredicted RBP11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 PKMYT1Q99640 499 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 MED10Q9BTT4 135 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 TDP1Q9NUW8 608 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 STIM2Q9P246 746 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 HSFX1Q9UBD0 423 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 MGAQ8IWI9 3026 aa11.64□□□□□ -0.55
CSNK1E-202ENST00000366216 SPTA1P02549 2419 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 TK2O00142 265 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 CLDN5O00501 218 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SART1O43290 800 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 PHF2O75151 1096 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 LRCH4O75427 683 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 RNF8O76064 485 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 GLI1P08151 1106 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 CD59P13987 128 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 DESP17661 470 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 TNFRSF8P28908 595 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 CHRNA3P32297 505 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 P2RY2P41231 377 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SSR1P43307 286 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SLC25A11Q02978 314 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 MESP2Q0VG99 397 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 VEPH1Q14D04 833 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SIX1Q15475 284 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 TRIP6Q15654 476 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 GAB4Q2WGN9 574 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SPDYCQ5MJ68 293 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 PEAR1Q5VY43 1037 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 LYSMD4Q5XG99 296 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 OVOS1Q6IE37 1185 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 CLEC20AQ6ZU45 233 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 MAATS1Q7Z4T9 603 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 FAM35AQ86V20 835 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 LRRTM3Q86VH5 581 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SCUBE3Q8IX30 993 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 KLHL7Q8IXQ5 586 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 MINDY1Q8N5J2 469 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 EMC1Q8N766 993 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 MAB21L3Q8N8X9 362 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 CEP76Q8TAP6 659 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 USP33Q8TEY7 942 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 RXFP2Q8WXD0 754 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 RLN3Q8WXF3 142 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SMARCD1Q96GM5 515 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 SPACA7Q96KW9 195 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 ECT2Q9H8V3 914 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 KIF9Q9HAQ2 790 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 CSNK1G1Q9HCP0 422 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 DMGDHQ9UI17 866 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 MMP17Q9ULZ9 603 aa11.63□□□□□ -0.55
CSNK1E-202ENST00000366216 FAM187AA6NFU0 413 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 BHMG1C9JSJ3 638 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 PIK3R2O00459 728 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 RAD51CO43502 376 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 ATP8B1O43520 1251 aa11.62□□□□□ -0.55
CSNK1E-202ENST00000366216 AP1G2O75843 785 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms