RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 XPO7Q9UIA9 1087 aaKnown RBP6.98□□□□□ -1.29
RNU1-55P-201ENST00000365510 HS3ST4Q9Y661 456 aa6.98□□□□□ -1.29
RNU1-55P-201ENST00000365510 RALGAPA1Q6GYQ0 2036 aa6.98□□□□□ -1.29
RNU1-55P-201ENST00000365510 CHD8Q9HCK8 2581 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 E2F8A0AVK6 867 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ANTXRLA6NF34 631 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 CCDC188H7C350 402 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 I6L893 689 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 APOC4-APOC2K7ER74 178 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SLC9A3R1O14745 358 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 MCF2LO15068 1137 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ACSL4O60488 711 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 CST8O60676 142 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 LILRB5O75023 590 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 PRAMEF12O95522 483 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 APOC2P02655 101 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 TDGF1P13385 188 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 KRT10P13645 584 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 TCF3P15923 654 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 TACR2P21452 398 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 FCARP24071 287 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 CHKAP35790 457 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 GGCXP38435 758 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 DYNLT1P63172 113 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 MMRN1Q13201 1228 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 KLF1Q13351 362 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 AUHQ13825 339 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 DPYSQ14117 519 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 LLGL1Q15334 1064 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZNF77Q15935 545 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 FAM133BQ5BKY9 247 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 RABGAP1LQ5R372 815 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ADGRF1Q5T601 910 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 MANEALQ5VSG8 457 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SLC9A4Q6AI14 798 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 NADSYN1Q6IA69 706 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 TMCO3Q6UWJ1 677 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 Q6ZNB5 142 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 PRR23BQ6ZRT6 265 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 BBS12Q6ZW61 710 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 HTR3DQ70Z44 454 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZNF572Q7Z3I7 529 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ARID3BQ8IVW6 561 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 LGI2Q8N0V4 545 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 CELF5Q8N6W0 485 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 KIAA1958Q8N8K9 716 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 TTC13Q8NBP0 860 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZBTB44Q8NCP5 570 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SMARCD2Q92925 531 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 CLDN23Q96B33 292 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZFYVE19Q96K21 471 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 RUNDC3BQ96NL0 473 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ASB16Q96NS5 453 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 RNF157Q96PX1 679 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 PRMT1Q99873 361 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 HEMGNQ9BXL5 484 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 FRMD8P1Q9BZ68 369 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZYG11BQ9C0D3 744 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SMG9Q9H0W8 520 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SEMA4AQ9H3S1 761 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 GKN1Q9NS71 199 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 HOMER3Q9NSC5 361 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZSCAN32Q9NX65 697 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SMARCAL1Q9NZC9 954 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 CWC15Q9P013 229 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 PPARGC1AQ9UBK2 798 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 STOML2Q9UJZ1 356 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 AGO1Q9UL18 857 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 VANGL2Q9ULK5 521 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SMG5Q9UPR3 1016 aaKnown RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 CCL26Q9Y258 94 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 SNX10Q9Y5X0 201 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 ZFP37Q9Y6Q3 630 aaPredicted RBP6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 DENND4CQ5VZ89 1909 aa6.97□□□□□ -1.29
RNU1-55P-201ENST00000365510 HELZP42694 1942 aaKnown RBP6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 IGLV3-10A0A075B6K4 115 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 A0A1B0GVM2 712 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 TCAF2A6NFQ2 919 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 FAM72CH0Y354 149 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 PDE2AO00408 941 aaPredicted RBP6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 DCLK1O15075 740 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 AXIN1O15169 862 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 MFSD11O43934 449 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 GREM1O60565 184 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 PHF2O75151 1096 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 ZNF189O75820 626 aaPredicted RBP6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 KLKB1P03952 638 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 CYBBP04839 570 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 HOXB3P14651 431 aaPredicted RBP6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 RHOQP17081 205 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 ERCC2P18074 760 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 IL4RP24394 825 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 GDI1P31150 447 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 SLC6A4P31645 630 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 NR2C2P49116 596 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 MAPKAPK2P49137 400 aa6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 MLLT6P55198 1093 aaPredicted RBP6.96□□□□□ -1.3
RNU1-55P-201ENST00000365510 ZXDBP98169 803 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms