RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 IL1RAPL1Q9NZN1 696 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 TFR2Q9UP52 801 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 SLC27A5Q9Y2P5 690 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 URADA6NGE7 173 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 XPO1O14980 1071 aaKnown RBP13.22□□□□□ -0.29
NLRC3-202ENST00000359128 HLA-DQA2P01906 255 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 TRAF2Q12933 501 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 CCDC153Q494R4 210 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 DCLRE1AQ6PJP8 1040 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 FAM228AQ86W67 206 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 ZBTB45Q96K62 511 aaPredicted RBP13.22□□□□□ -0.29
NLRC3-202ENST00000359128 PORCNQ9H237 461 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 ADAM30Q9UKF2 790 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 GSAPA4D1B5 854 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 ZNF862O60290 1169 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 CDC25CP30307 473 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 RXRGP48443 463 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 RGS1Q08116 209 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 LYPLAL1Q5VWZ2 237 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 METTL3Q86U44 580 aaKnown RBP13.22□□□□□ -0.29
NLRC3-202ENST00000359128 PACSIN1Q9BY11 444 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 ARL15Q9NXU5 204 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 VWDEQ8N2E2 1590 aa13.22□□□□□ -0.29
NLRC3-202ENST00000359128 FAM228BP0C875 321 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 CXCR2P25025 360 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 BNC2Q6ZN30 1099 aaPredicted RBP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 TMEM132CQ8N3T6 1108 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 ATG16L2Q8NAA4 619 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 EPS8L3Q8TE67 593 aaKnown RBP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 CASKIN2Q8WXE0 1202 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 CCT8L2Q96SF2 557 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 MLPHQ9BV36 600 aaPredicted RBP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 OPTCQ9UBM4 332 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 PCDHA3Q9Y5H8 950 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 WBP4O75554 376 aaKnown RBP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 IFNGR2P38484 337 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 BIKQ13323 160 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 PPIGQ13427 754 aaKnown RBP eCLIP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 SEC23AQ15436 765 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 CHPFQ8IZ52 775 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 CYP2W1Q8TAV3 490 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 APBB2Q92870 758 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 TMEM237Q96Q45 408 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 MID1IP1Q9NPA3 183 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 IL17RBQ9NRM6 502 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 ST3GAL5Q9UNP4 418 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 RWDD3Q9Y3V2 267 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 MST1RQ04912 1400 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 CCDC154A6NI56 674 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 TRDMT1O14717 391 aaKnown RBP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 EIF3HO15372 352 aaKnown RBP eCLIP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 LAG3P18627 525 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 MAPK8P45983 427 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 SERPINH1P50454 418 aaKnown RBP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 DDR1Q08345 913 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 ZNF470Q6ECI4 717 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 EPHX4Q8IUS5 362 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 CD99L2Q8TCZ2 262 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 TRPM4Q8TD43 1214 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 FIG4Q92562 907 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 DTNBP1Q96EV8 351 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 MAGEB18Q96M61 343 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 S100A13Q99584 98 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 RPL9P32969 192 aaKnown RBP13.21□□□□□ -0.29
NLRC3-202ENST00000359128 COPZ1P61923 177 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 MFSD7Q6UXD7 560 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 TMEM26Q6ZUK4 368 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 GPSM1Q86YR5 675 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 SPPL2AQ8TCT8 520 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
NLRC3-202ENST00000359128 ARHGAP23Q9P227 1491 aa13.21□□□□□ -0.3
NLRC3-202ENST00000359128 TRIM32Q13049 653 aa13.21□□□□□ -0.3
NLRC3-202ENST00000359128 ZFPM1Q8IX07 1006 aa13.21□□□□□ -0.3
NLRC3-202ENST00000359128 MTERF3Q96E29 417 aa13.21□□□□□ -0.3
NLRC3-202ENST00000359128 KPNA5O15131 536 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 CCL16O15467 120 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 VAV1P15498 845 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
NLRC3-202ENST00000359128 HSD17B3P37058 310 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 CSNK2BP67870 215 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 SNAP47Q5SQN1 464 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 SYT12Q8IV01 421 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 RNASE11Q8TAA1 199 aaKnown RBP13.2□□□□□ -0.3
NLRC3-202ENST00000359128 COL26A1Q96A83 441 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 SLC39A8Q9C0K1 460 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 GIT1Q9Y2X7 761 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 FRMPD4Q14CM0 1322 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 SCAMP3O14828 347 aaKnown RBP13.2□□□□□ -0.3
NLRC3-202ENST00000359128 UBDO15205 165 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 VPS4BO75351 444 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 NPR3P17342 541 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 E2F4Q16254 413 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 ALKBH2Q6NS38 261 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 UBE2E3Q969T4 207 aa13.2□□□□□ -0.3
NLRC3-202ENST00000359128 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms