RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 CYTH1Q15438 398 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 C15orf59Q2T9L4 293 aaPredicted RBP12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 ZNF699Q32M78 642 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 ANKDD1AQ495B1 522 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 ZBED5Q49AG3 693 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 NHSL2Q5HYW2 709 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 CNTD1Q8N815 330 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 GIPC3Q8TF64 312 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 RXFP2Q8WXD0 754 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 COX4I2Q96KJ9 171 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 ADPGKQ9BRR6 497 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 SNX15Q9NRS6 342 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 DUS2Q9NX74 493 aaKnown RBP12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 SUCOQ9UBS9 1254 aaKnown RBP12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 EBF1Q9UH73 591 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 ADAM28Q9UKQ2 775 aa12.37□□□□□ -0.43
SMARCAL1-201ENST00000357276 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 GRID2O43424 1007 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 PRPSAP2O60256 369 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 MICAL2O94851 1124 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 HSPA4LO95757 839 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 PGAM1P18669 254 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 MTERF2Q49AM1 385 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 SCARA5Q6ZMJ2 495 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 MTMR14Q8NCE2 650 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 SLCO4A1Q96BD0 722 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 RMND5BQ96G75 393 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 QKIQ96PU8 341 aaKnown RBP eCLIP12.36□□□□□ -0.433e-6■■■■□ 24.8
SMARCAL1-201ENST00000357276 CLK4Q9HAZ1 481 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 PTBP2Q9UKA9 531 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 CPSF3Q9UKF6 684 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 STX16-NPEPL1H3BU86 382 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 MDM4O15151 490 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 HDAC3O15379 428 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 NAA20P61599 178 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 CCDC14Q49A88 953 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 FAM102AQ5T9C2 384 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 LRRN4Q8WUT4 740 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 EME1Q96AY2 570 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 TBCBQ99426 244 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 GMLQ99445 158 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 HIPK3Q9H422 1215 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 WDR55Q9H6Y2 383 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 EIF2B3Q9NR50 452 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 LRRIQ4A6NIV6 560 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 TRIM38O00635 465 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 TRIM13O60858 407 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 CD19P15391 556 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 ZNF12P17014 697 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 TYK2P29597 1187 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 ACTR2P61160 394 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 C16orf72Q14CZ0 275 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 NRF1Q16656 503 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 CA9Q16790 459 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 ZNF829Q3KNS6 432 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 DALRD3Q5D0E6 543 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 GRTP1Q5TC63 336 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 TMEM151AQ8N4L1 468 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 DQX1Q8TE96 717 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 FAM151AQ8WW52 585 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 USP13Q92995 863 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 ATP6V1E2Q96A05 226 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 TWNKQ96RR1 684 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 WRNIP1Q96S55 665 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 SLC29A1Q99808 456 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 MCMBPQ9BTE3 642 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 JPH1Q9HDC5 661 aaPredicted RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 OXSMQ9NWU1 459 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 SARDHQ9UL12 918 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 RAP2CQ9Y3L5 183 aa12.36□□□□□ -0.43
SMARCAL1-201ENST00000357276 PLOD2O00469 737 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 MSCO60682 206 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 MAP3K6O95382 1288 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 AMHP03971 560 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 COL6A2P12110 1019 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 P4HA1P13674 534 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 GP5P40197 560 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 CD151P48509 253 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 RHDQ02161 417 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 C12orf43Q96C57 262 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 PIWIL1Q96J94 861 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 HNRNPABQ99729 332 aaKnown RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 CPNE1Q99829 537 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 GATA5Q9BWX5 397 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 DRC3Q9H069 523 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ILKAPQ9H0C8 392 aaPredicted RBP12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 EFCAB1Q9HAE3 211 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 PFDN4Q9NQP4 134 aa12.35□□□□□ -0.43
SMARCAL1-201ENST00000357276 ZNF711Q9Y462 761 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms