RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 HAUS8Q9BT25 410 aa11.08□□□□□ -0.64
SND1-201ENST00000354725 EBF3Q9H4W6 596 aa11.08□□□□□ -0.64
SND1-201ENST00000354725 ARHGAP28Q9P2N2 729 aa11.08□□□□□ -0.64
SND1-201ENST00000354725 FARP1Q9Y4F1 1045 aaPredicted RBP11.08□□□□□ -0.64
SND1-201ENST00000354725 MAD1L1Q9Y6D9 718 aa11.08□□□□□ -0.64
SND1-201ENST00000354725 ALPK3Q96L96 1907 aa11.08□□□□□ -0.64
SND1-201ENST00000354725 FAM47DPA6NHR8 397 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 MCF2LO15068 1137 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 KPNA6O60684 536 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 FKBP9O95302 570 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 GAS8O95995 478 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 PIGRP01833 764 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 RALAP11233 206 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 ATF2P15336 505 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 HNRNPDQ14103 355 aaKnown RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 CCDC58Q4VC31 144 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 CCDC33Q8N5R6 958 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 TRPV1Q8NER1 839 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 SOCS4Q8WXH5 440 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 DACT3Q96B18 629 aaPredicted RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 OSBPL6Q9BZF3 934 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 SLC38A7Q9NVC3 462 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 FBXO40Q9UH90 709 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 ANAPC5Q9UJX4 755 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 DNALI1O14645 258 aaPredicted RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 IDH3BO43837 385 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 HEXBP07686 556 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 IL32P24001 234 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 PTPN4P29074 926 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 WNT7BP56706 349 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 PSMC5P62195 406 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 CCNA1P78396 465 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 CDC16Q13042 620 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 MED21Q13503 144 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 TAZQ16635 292 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 LRRC38Q5VT99 294 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 ZER1Q7Z7L7 766 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 ALLCQ8N6M5 410 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 TRIB2Q92519 343 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 KIAA1586Q9HCI6 787 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.07□□□□□ -0.644e-6■■■■□ 21.2
SND1-201ENST00000354725 ANGPTL2Q9UKU9 493 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 DRG1Q9Y295 367 aaKnown RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 TMEM150BA6NC51 233 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 C3orf70A6NLC5 250 aaPredicted RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 EDF1O60869 148 aaKnown RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 HAUS5O94927 633 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 VNN1O95497 513 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 JAK3P52333 1124 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 IST1P53990 364 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 VCPP55072 806 aaKnown RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 PEX3P56589 373 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 NOP14P78316 857 aaKnown RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 NKX3-2P78367 333 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 KCNC4Q03721 635 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 PGM5Q15124 567 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 STILQ15468 1287 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 CCL14Q16627 93 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 TIGD2Q4W5G0 525 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 ERI1Q8IV48 349 aaKnown RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 UTP15Q8TED0 518 aaKnown RBP11.07□□□□□ -0.64
SND1-201ENST00000354725 RNF38Q9H0F5 515 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 CFL2Q9Y281 166 aa11.07□□□□□ -0.64
SND1-201ENST00000354725 THAP12O43422 761 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 SFNP31947 248 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 KRT76Q01546 638 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 C1QBPQ07021 282 aaKnown RBP11.06□□□□□ -0.64
SND1-201ENST00000354725 RNASEH2BQ5TBB1 312 aaKnown RBP11.06□□□□□ -0.64
SND1-201ENST00000354725 ARHGAP11AQ6P4F7 1023 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 TRIM72Q6ZMU5 477 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 CTU1Q7Z7A3 348 aaKnown RBP11.06□□□□□ -0.64
SND1-201ENST00000354725 GALNT7Q86SF2 657 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 METTL25Q8N6Q8 603 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 GLIS1Q8NBF1 620 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 ZNF398Q8TD17 642 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 ARMC5Q96C12 935 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 NLRP4Q96MN2 994 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 MMP19Q99542 508 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 DHRS9Q9BPW9 319 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 TRPV6Q9H1D0 765 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 C8orf4Q9NR00 106 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 MALT1Q9UDY8 824 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 ASIC3Q9UHC3 531 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 PTPRJQ12913 1337 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 SNTNA6NMZ2 147 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 ALOX15BO15296 676 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 SNAI1O95863 264 aaPredicted RBP11.06□□□□□ -0.64
SND1-201ENST00000354725 CLPTM1O96005 669 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 IL1BP01584 269 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 CFHP08603 1231 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 MAGEA4P43358 317 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 FLT3LGP49771 235 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 RPS6P62753 249 aaKnown RBP11.06□□□□□ -0.64
SND1-201ENST00000354725 ADAM17P78536 824 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 CNTN2Q02246 1040 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 CDK18Q07002 472 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 RHOT1Q8IXI2 618 aa11.06□□□□□ -0.64
SND1-201ENST00000354725 NIPA2Q8N8Q9 360 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 888.9 ms