RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 C10orf82Q8WW14 230 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 THOC1Q96FV9 657 aaKnown RBP20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 FCRL2Q96LA5 508 aaPredicted RBP20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 PGLYRP2Q96PD5 576 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 MLPHQ9BV36 600 aaPredicted RBP20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 FBXO44Q9H4M3 255 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 CATSPERBQ9H7T0 1116 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 LRRC40Q9H9A6 602 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 BFARQ9NZS9 450 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 VANGL2Q9ULK5 521 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 TRIM17Q9Y577 477 aa20.83■□□□□ 0.93
CHRNA3-202ENST00000348639 ARHGAP42A6NI28 874 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 KCNU1A8MYU2 1149 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 ENPP3O14638 875 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 JCHAINP01591 159 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 CCNCP24863 283 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 GATMP50440 423 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 HTRA3P83110 453 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 BFSP2Q13515 415 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 ARTNQ5T4W7 220 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 PACS1Q6VY07 963 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 ZNF398Q8TD17 642 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 TBC1D31Q96DN5 1066 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 SERPINB11Q96P15 392 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 SLC13A1Q9BZW2 595 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 NUDT5Q9UKK9 219 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 PCDHB5Q9Y5E4 795 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 RPS6KL1Q9Y6S9 549 aa20.83■□□□□ 0.92
CHRNA3-202ENST00000348639 NUP205Q92621 2012 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 KLF11O14901 512 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 USP12O75317 370 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 TROVE2P10155 538 aaKnown RBP eCLIP20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 ALDH3A1P30838 453 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 CRHR1P34998 444 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 MAGEA11P43364 429 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 DDR2Q16832 855 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 ARHGAP12Q8IWW6 846 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 FAM126BQ8IXS8 530 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 NDUFAF2Q8N183 169 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 B3GALT6Q96L58 329 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 TSSK1BQ9BXA7 367 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 OSER1Q9NX31 292 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 CDK7P50613 346 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 NRG1Q02297 640 aaPredicted RBP20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 MRPL58Q14197 206 aaKnown RBP20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 FRG1Q14331 258 aaKnown RBP20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 PRPSAP1Q14558 356 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 GPNMBQ14956 572 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 SETDB1Q15047 1291 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 FAM171A1Q5VUB5 890 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 MSANTD2Q6P1R3 559 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 TMEM135Q86UB9 458 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 ARHGAP18Q8N392 663 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 DNAAF3Q8N9W5 541 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 ANKLE1Q8NAG6 615 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 ACMSDQ8TDX5 336 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 UNC93B1Q9H1C4 597 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 PCMTD2Q9NV79 361 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 ADAM28Q9UKQ2 775 aa20.82■□□□□ 0.92
CHRNA3-202ENST00000348639 TTC3P53804 2025 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 DFFAO00273 331 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 CACNG3O60359 315 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 DCTN3O75935 186 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 IL1BP01584 269 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 NEFHP12036 1026 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 NPY2RP49146 381 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 GPR15P49685 360 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 NCALDP61601 193 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 CTXN3Q4LDR2 81 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 KLHDC8BQ8IXV7 354 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 ATPAF2Q8N5M1 289 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 CNTD1Q8N815 330 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 CERS2Q96G23 380 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 FCRL3Q96P31 734 aaPredicted RBP20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 ECT2Q9H8V3 914 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 LRFN2Q9ULH4 789 aa20.81■□□□□ 0.92
CHRNA3-202ENST00000348639 CFAP73A6NFT4 308 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 PSMD3O43242 534 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 BGNP21810 368 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 PLEKHG4Q58EX7 1191 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 RASSF3Q86WH2 238 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 TRIM42Q8IWZ5 723 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 C1orf74Q96LT6 269 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 LRRC37BQ96QE4 947 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 SEZ6LQ9BYH1 1024 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 NPHS2Q9NP85 383 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 IL37Q9NZH6 218 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 ZFATQ9P243 1243 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 SLC17A6Q9P2U8 582 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 HCSTQ9UBK5 93 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 CHKBQ9Y259 395 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 TLR6Q9Y2C9 796 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 MAGEB16A2A368 324 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 OR6C75A6NL08 312 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 AP3B1O00203 1094 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 PQBP1O60828 265 aaKnown RBP20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 USP1O94782 785 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 TGDSO95455 350 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 CCNB1P14635 433 aa20.8■□□□□ 0.92
CHRNA3-202ENST00000348639 ARPP19P56211 112 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms