RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 DDX43Q9NXZ2 648 aaKnown RBP12.12□□□□□ -0.47
APP-201ENST00000346798 VANGL2Q9ULK5 521 aa12.12□□□□□ -0.47
APP-201ENST00000346798 EEF2KO00418 725 aaKnown RBP12.11□□□□□ -0.47
APP-201ENST00000346798 UQCRBP14927 111 aa12.11□□□□□ -0.47
APP-201ENST00000346798 TKTP29401 623 aaKnown RBP12.11□□□□□ -0.47
APP-201ENST00000346798 ZNF460Q14592 562 aa12.11□□□□□ -0.47
APP-201ENST00000346798 PDK3Q15120 406 aa12.11□□□□□ -0.47
APP-201ENST00000346798 SLC26A9Q7LBE3 791 aa12.11□□□□□ -0.47
APP-201ENST00000346798 CCNYL1Q8N7R7 359 aa12.11□□□□□ -0.47
APP-201ENST00000346798 SLC7A14Q8TBB6 771 aa12.11□□□□□ -0.47
APP-201ENST00000346798 RBPJLQ9UBG7 517 aa12.11□□□□□ -0.47
APP-201ENST00000346798 APPL1Q9UKG1 709 aa12.11□□□□□ -0.47
APP-201ENST00000346798 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
APP-201ENST00000346798 PCDHGB5Q9Y5G0 923 aa12.11□□□□□ -0.47
APP-201ENST00000346798 SPTLC1O15269 473 aa12.11□□□□□ -0.47
APP-201ENST00000346798 BEST1O76090 585 aa12.11□□□□□ -0.47
APP-201ENST00000346798 ALDH1A2O94788 518 aa12.11□□□□□ -0.47
APP-201ENST00000346798 C2P06681 752 aa12.11□□□□□ -0.47
APP-201ENST00000346798 GRIA2P42262 883 aa12.11□□□□□ -0.47
APP-201ENST00000346798 PTPN9P43378 593 aa12.11□□□□□ -0.47
APP-201ENST00000346798 BCAT1P54687 386 aa12.11□□□□□ -0.47
APP-201ENST00000346798 SNX16P57768 344 aa12.11□□□□□ -0.47
APP-201ENST00000346798 FOLH1Q04609 750 aa12.11□□□□□ -0.47
APP-201ENST00000346798 IL31Q6EBC2 164 aa12.11□□□□□ -0.47
APP-201ENST00000346798 ARMCX2Q7L311 632 aa12.11□□□□□ -0.47
APP-201ENST00000346798 ACMSDQ8TDX5 336 aa12.11□□□□□ -0.47
APP-201ENST00000346798 ACTRT2Q8TDY3 377 aa12.11□□□□□ -0.47
APP-201ENST00000346798 MED10Q9BTT4 135 aa12.11□□□□□ -0.47
APP-201ENST00000346798 GATA5Q9BWX5 397 aaPredicted RBP12.11□□□□□ -0.47
APP-201ENST00000346798 SPATA16Q9BXB7 569 aa12.11□□□□□ -0.47
APP-201ENST00000346798 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
APP-201ENST00000346798 SORCS3Q9UPU3 1222 aa12.11□□□□□ -0.47
APP-201ENST00000346798 DTNAQ9Y4J8 743 aa12.11□□□□□ -0.47
APP-201ENST00000346798 ZNF195O14628 629 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CCNT2O60583 730 aaKnown RBP12.1□□□□□ -0.47
APP-201ENST00000346798 TRPA1O75762 1119 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CNMDO75829 334 aa12.1□□□□□ -0.47
APP-201ENST00000346798 RECQL4O94761 1208 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CYP2C8P10632 490 aa12.1□□□□□ -0.47
APP-201ENST00000346798 SPRP35270 261 aaPredicted RBP12.1□□□□□ -0.47
APP-201ENST00000346798 NAGLUP54802 743 aa12.1□□□□□ -0.47
APP-201ENST00000346798 BTKQ06187 659 aa12.1□□□□□ -0.47
APP-201ENST00000346798 SH3D19Q5HYK7 790 aa12.1□□□□□ -0.47
APP-201ENST00000346798 FAM219BQ5XKK7 198 aa12.1□□□□□ -0.47
APP-201ENST00000346798 STEAP4Q687X5 459 aa12.1□□□□□ -0.47
APP-201ENST00000346798 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
APP-201ENST00000346798 C4orf22Q6V702 233 aa12.1□□□□□ -0.47
APP-201ENST00000346798 ACAD11Q709F0 780 aa12.1□□□□□ -0.47
APP-201ENST00000346798 ANKRD52Q8NB46 1076 aa12.1□□□□□ -0.47
APP-201ENST00000346798 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.1□□□□□ -0.47
APP-201ENST00000346798 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
APP-201ENST00000346798 CELF6Q96J87 481 aaKnown RBP12.1□□□□□ -0.47
APP-201ENST00000346798 CNBD2Q96M20 576 aa12.1□□□□□ -0.47
APP-201ENST00000346798 OMDQ99983 421 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CDH19Q9H159 772 aa12.1□□□□□ -0.47
APP-201ENST00000346798 COPS7BQ9H9Q2 264 aaPredicted RBP12.1□□□□□ -0.47
APP-201ENST00000346798 DNAJC28Q9NX36 388 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CDY2AQ9Y6F7 541 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CDY1Q9Y6F8 540 aa12.1□□□□□ -0.47
APP-201ENST00000346798 H3BRB1 525 aa12.1□□□□□ -0.47
APP-201ENST00000346798 SLC26A2P50443 739 aa12.1□□□□□ -0.47
APP-201ENST00000346798 DEUP1Q05D60 604 aa12.1□□□□□ -0.47
APP-201ENST00000346798 PDK1Q15118 436 aa12.1□□□□□ -0.47
APP-201ENST00000346798 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.1□□□□□ -0.47
APP-201ENST00000346798 FSCBQ5H9T9 825 aa12.1□□□□□ -0.47
APP-201ENST00000346798 ZNF484Q5JVG2 852 aa12.1□□□□□ -0.47
APP-201ENST00000346798 AAGABQ6PD74 315 aa12.1□□□□□ -0.47
APP-201ENST00000346798 IYDQ6PHW0 289 aa12.1□□□□□ -0.47
APP-201ENST00000346798 MTHFD1LQ6UB35 978 aa12.1□□□□□ -0.47
APP-201ENST00000346798 BEST2Q8NFU1 509 aa12.1□□□□□ -0.47
APP-201ENST00000346798 URGCPQ8TCY9 931 aa12.1□□□□□ -0.47
APP-201ENST00000346798 OLFM3Q96PB7 478 aa12.1□□□□□ -0.47
APP-201ENST00000346798 APBA2Q99767 749 aa12.1□□□□□ -0.47
APP-201ENST00000346798 TUT1Q9H6E5 874 aaKnown RBP12.1□□□□□ -0.47
APP-201ENST00000346798 NMRAL1Q9HBL8 299 aa12.1□□□□□ -0.47
APP-201ENST00000346798 LRRC4Q9HBW1 653 aa12.1□□□□□ -0.47
APP-201ENST00000346798 FZD10Q9ULW2 581 aa12.1□□□□□ -0.47
APP-201ENST00000346798 SF3B1O75533 1304 aaKnown RBP eCLIP12.1□□□□□ -0.47
APP-201ENST00000346798 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
APP-201ENST00000346798 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
APP-201ENST00000346798 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
APP-201ENST00000346798 PIGNO95427 931 aa12.1□□□□□ -0.47
APP-201ENST00000346798 IGFBP6P24592 240 aaPredicted RBP12.1□□□□□ -0.47
APP-201ENST00000346798 MATKP42679 507 aa12.1□□□□□ -0.47
APP-201ENST00000346798 ALDH1A3P47895 512 aa12.1□□□□□ -0.47
APP-201ENST00000346798 SERPINB8P50452 374 aa12.1□□□□□ -0.47
APP-201ENST00000346798 ARHGAP1Q07960 439 aa12.1□□□□□ -0.47
APP-201ENST00000346798 GK3PQ14409 553 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CNGA3Q16281 694 aa12.1□□□□□ -0.47
APP-201ENST00000346798 C11orf91Q3C1V1 193 aa12.1□□□□□ -0.47
APP-201ENST00000346798 APLFQ8IW19 511 aaPredicted RBP12.1□□□□□ -0.47
APP-201ENST00000346798 SNX31Q8N9S9 440 aa12.1□□□□□ -0.47
APP-201ENST00000346798 ZSCAN18Q8TBC5 510 aaPredicted RBP12.1□□□□□ -0.47
APP-201ENST00000346798 RCN3Q96D15 328 aa12.1□□□□□ -0.47
APP-201ENST00000346798 RBBP8Q99708 897 aa12.1□□□□□ -0.47
APP-201ENST00000346798 CPNE1Q99829 537 aa12.1□□□□□ -0.47
APP-201ENST00000346798 PIGVQ9NUD9 493 aa12.1□□□□□ -0.47
APP-201ENST00000346798 SHROOM3Q8TF72 1996 aa12.1□□□□□ -0.47
APP-201ENST00000346798 TMEM233B4DJY2 109 aa12.09□□□□□ -0.47
APP-201ENST00000346798 TRIM13O60858 407 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms