RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 TPGS1Q6ZTW0 290 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 SLC41A1Q8IVJ1 513 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 DQX1Q8TE96 717 aaKnown RBP13.61□□□□□ -0.23
CASC4-202ENST00000345795 RAB3IPQ96QF0 476 aaPredicted RBP13.61□□□□□ -0.23
CASC4-202ENST00000345795 FTHL17Q9BXU8 183 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 FCHO1O14526 889 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 CHUKO15111 745 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 CHRNA1P02708 482 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 PPM1FP49593 454 aaPredicted RBP13.61□□□□□ -0.23
CASC4-202ENST00000345795 SREBF2Q12772 1141 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 TCEA2Q15560 299 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 KCNMB4Q86W47 210 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 AGAP11Q8TF27 550 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 ZNF317Q96PQ6 595 aaPredicted RBP13.61□□□□□ -0.23
CASC4-202ENST00000345795 EBF4Q9BQW3 602 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 WDR55Q9H6Y2 383 aaPredicted RBP13.61□□□□□ -0.23
CASC4-202ENST00000345795 GMIPQ9P107 970 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 GRID1Q9ULK0 1009 aa13.61□□□□□ -0.23
CASC4-202ENST00000345795 NEMP2A6NFY4 417 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 ZWINTO95229 277 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 HNRNPLP14866 589 aaKnown RBP eCLIP13.6□□□□□ -0.239e-11■■■■□ 24.8
CASC4-202ENST00000345795 MPP1Q00013 466 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 MOGSQ13724 837 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 FAM219BQ5XKK7 198 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 NCBP2-AS2Q69YL0 99 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 SCIMPQ6UWF3 145 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.6□□□□□ -0.23
CASC4-202ENST00000345795 PPFIBP2Q8ND30 876 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 NMUR2Q9GZQ4 415 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 MGEA5O60502 916 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 ZNF865P0CJ78 1059 aaPredicted RBP13.6□□□□□ -0.23
CASC4-202ENST00000345795 SLC25A3Q00325 362 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 IRF9Q00978 393 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 RHBDF2Q6PJF5 856 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 SLC26A9Q7LBE3 791 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 SAPCD2Q86UD0 394 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 UNC93AQ86WB7 457 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 C10orf107Q8IVU9 208 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.6□□□□□ -0.23
CASC4-202ENST00000345795 ESAMQ96AP7 390 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 HBEGFQ99075 208 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 EBNA1BP2Q99848 306 aaKnown RBP13.6□□□□□ -0.23
CASC4-202ENST00000345795 ARHGEF38Q9NXL2 777 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 SENP1Q9P0U3 644 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 XPO1O14980 1071 aaKnown RBP13.6□□□□□ -0.23
CASC4-202ENST00000345795 MX2P20592 715 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 MTFR1Q15390 333 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 DDIASQ8IXT1 998 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 KCTD4Q8WVF5 259 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 CCT6BQ92526 530 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 XAB2Q9HCS7 855 aaKnown RBP13.6□□□□□ -0.23
CASC4-202ENST00000345795 ADA2Q9NZK5 511 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 IPO11Q9UI26 975 aaKnown RBP13.6□□□□□ -0.23
CASC4-202ENST00000345795 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
CASC4-202ENST00000345795 TK2O00142 265 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 TPST1O60507 370 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 GJA1P17302 382 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 CDH13P55290 713 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 ELF3P78545 371 aaPredicted RBP13.59□□□□□ -0.23
CASC4-202ENST00000345795 CDC42EP1Q00587 391 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 TAF10Q12962 218 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 KIF19Q2TAC6 998 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 ITPRIPL1Q6GPH6 555 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 NAPRTQ6XQN6 538 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 LRRTM3Q86VH5 581 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
CASC4-202ENST00000345795 TMEM30AQ9NV96 361 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 SLC24A2Q9UI40 661 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 UNC80Q8N2C7 3258 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 SPECC1L-ADORA2AF8WAN1 911 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 GIPC1O14908 333 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 SH3BGRLO75368 114 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 CCNB1P14635 433 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 NMBRP28336 390 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 CRYMQ14894 314 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 LRRC73Q5JTD7 316 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 OR10T2Q8NGX3 314 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 PPWD1Q96BP3 646 aaKnown RBP13.59□□□□□ -0.23
CASC4-202ENST00000345795 APOPT1Q96IL0 206 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 HSFY1Q96LI6 401 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 ZNF670Q9BS34 389 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 FAM96AQ9H5X1 160 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 PFDN4Q9NQP4 134 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 GKN1Q9NS71 199 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 KIAA1217Q5T5P2 1943 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 ANP32DO95626 131 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 ALDH2P05091 517 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 EPHA3P29320 983 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 OR1D2P34982 312 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 TBX4P57082 545 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 NCALDP61601 193 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 PLD1Q13393 1074 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 RCN1Q15293 331 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 SGO1Q5FBB7 561 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 TMEM110Q86TL2 294 aa13.59□□□□□ -0.23
CASC4-202ENST00000345795 CCDC117Q8IWD4 279 aaPredicted RBP13.59□□□□□ -0.23
CASC4-202ENST00000345795 LGI2Q8N0V4 545 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms