RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SLC39A4Q6P5W5 647 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 RIPOR1Q6ZS17 1223 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 EP400NLQ6ZTU2 488 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 SLC22A9Q8IVM8 553 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 TMEM86AQ8N2M4 240 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PCDH20Q8N6Y1 951 aaKnown RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 DDI1Q8WTU0 396 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 C18orf25Q96B23 403 aaPredicted RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 SERPINB11Q96P15 392 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ZNF711Q9Y462 761 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 PCDHA11Q9Y5I1 949 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 RGPD8O14715 1765 aaPredicted RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 SMIM28A0A1B0GU29 152 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 MSCO60682 206 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 FKBP9O95302 570 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 C2P06681 752 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 TCF4P15884 667 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 GABRB2P47870 512 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 ANKS6Q68DC2 871 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 FKBP9P1Q75LS8 142 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 SLC26A9Q7LBE3 791 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 SZRD1Q7Z422 152 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 DENND2DQ9H6A0 471 aaPredicted RBP7.33□□□□□ -1.24
VCAN-202ENST00000342785 RGS18Q9NS28 235 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 FBXO5Q9UKT4 447 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 CHKBQ9Y259 395 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 RGPD1P0DJD0 1748 aa7.33□□□□□ -1.24
VCAN-202ENST00000342785 SOWAHBA6NEL2 793 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ZBTB24O43167 697 aaPredicted RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 TCEA3O75764 348 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CYBBP04839 570 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 UBAP2LQ14157 1087 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 SLC25A23Q9BV35 468 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 COLEC11Q9BWP8 271 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ENTPD7Q9NQZ7 604 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 TMEM247A6NEH6 219 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 C2CD4BA6NLJ0 364 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PAPSS1O43252 624 aaPredicted RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 TMCC1O94876 653 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 HNRNPCP07910 306 aaKnown RBP eCLIP7.32□□□□□ -1.24
VCAN-202ENST00000342785 SERPINA6P08185 405 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ATP6V1C1P21283 382 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 EPHA3P29320 983 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 NRLP54845 237 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CCDC15Q0P6D6 951 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 FASTKQ14296 549 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 GALNTL6Q49A17 601 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 STRADAQ7RTN6 431 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 OR6Y1Q8NGX8 325 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PGLYRP2Q96PD5 576 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 RBBP8Q99708 897 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 OMDQ99983 421 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 GOLGA2P5Q9HBQ8 144 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SNX15Q9NRS6 342 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 IL1RAPL1Q9NZN1 696 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 RABGEF1Q9UJ41 708 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SAC3D1A6NKF1 404 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CBX4O00257 560 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CLDN5O00501 218 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CRTAMO95727 393 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 AARS2Q5JTZ9 985 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 ZNF280DQ6N043 979 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 EFCAB3Q8N7B9 438 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 KCTD4Q8WVF5 259 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 DTNBP1Q96EV8 351 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 TBL1YQ9BQ87 522 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 FZD8Q9H461 694 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PNPOQ9NVS9 261 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SYBUQ9NX95 663 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 WWOXQ9NZC7 414 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ADAM28Q9UKQ2 775 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SLIT2O94813 1529 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CFAP99D6REC4 459 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CHRNB3Q05901 458 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 USP4Q13107 963 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 GTF2H3Q13889 308 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SLC10A6Q3KNW5 377 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PRAMEF19Q5SWL8 479 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 OLFML2BQ68BL8 750 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PIWIL4Q7Z3Z4 852 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 ULK2Q8IYT8 1036 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 VPS50Q96JG6 964 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SDCBP2Q9H190 292 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 WDR41Q9HAD4 459 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 KIF17Q9P2E2 1029 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 SLC13A4Q9UKG4 626 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 C2orf71A6NGG8 1288 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 BUD23O43709 281 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 COX4I1P13073 169 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 CYP2C18P33260 490 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 GPD2P43304 727 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ISLR2Q6UXK2 745 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 RNF180Q86T96 592 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 RBM15BQ8NDT2 890 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 ZNF555Q8NEP9 628 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 PCDH19Q8TAB3 1148 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 ZSCAN18Q8TBC5 510 aaPredicted RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 MAGEC3Q8TD91 643 aa7.32□□□□□ -1.24
VCAN-202ENST00000342785 GFM2Q969S9 779 aaKnown RBP7.32□□□□□ -1.24
VCAN-202ENST00000342785 COPS7BQ9H9Q2 264 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms