RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 KCNJ11Q14654 390 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 TRIP10Q15642 601 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 TMEM259Q4ZIN3 620 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 RPS6KL1Q9Y6S9 549 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.24■□□□□ 0.67
PSPC1-201ENST00000338910 M0QZ92 97 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 AVILO75366 819 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 ENDOD1O94919 500 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 PRKAR2AP13861 404 aaKnown RBP19.24■□□□□ 0.67
PSPC1-201ENST00000338910 PNPLA4P41247 253 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 EPHB1P54762 984 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 FOLH1Q04609 750 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 NOGQ13253 232 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 C1orf228Q6PIY5 440 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 ACTRT2Q8TDY3 377 aa19.24■□□□□ 0.67
PSPC1-201ENST00000338910 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 PTGESO14684 152 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 BIRC5O15392 142 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 PDE5AO76074 875 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 TFAP2AP05549 437 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 RPL5P46777 297 aaKnown RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 COPAP53621 1224 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 DEUP1Q05D60 604 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 BST2Q10589 180 aaKnown RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 TBL3Q12788 808 aaKnown RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 CBLBQ13191 982 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 KCNA10Q16322 511 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 B3GNT6Q6ZMB0 384 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 ADGRF2Q8IZF7 708 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 POU5F2Q8N7G0 328 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 APBB2Q92870 758 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 CFAP36Q96G28 342 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 DNAJC1Q96KC8 554 aaKnown RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 USP29Q9HBJ7 922 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 THAP1Q9NVV9 213 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 CDH22Q9UJ99 828 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 ST3GAL5Q9UNP4 418 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 MAD1L1Q9Y6D9 718 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 TXNDC9O14530 226 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 MCF2LO15068 1137 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 RAG1P15918 1043 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 SNX16P57768 344 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 HPCAP84074 193 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 SP3Q02447 781 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 STX3Q13277 289 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 CA9Q16790 459 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 SV2CQ496J9 727 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 BOLA3Q53S33 107 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 RBM44Q6ZP01 1051 aaKnown RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 TMC7Q7Z402 723 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 MARVELD2Q8N4S9 558 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 LZICQ8WZA0 190 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 SIKE1Q9BRV8 207 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 XAB2Q9HCS7 855 aaKnown RBP19.23■□□□□ 0.67
PSPC1-201ENST00000338910 POMPQ9Y244 141 aa19.23■□□□□ 0.67
PSPC1-201ENST00000338910 SF3B1O75533 1304 aaKnown RBP eCLIP19.23■□□□□ 0.672e-6■■■■■ 155.1
PSPC1-201ENST00000338910 H3BNX3 289 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 CHRNA1P02708 482 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 IL4RP24394 825 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 ACAT1P24752 427 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 L1CAMP32004 1257 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 AFF1P51825 1210 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 ATXN1P54253 815 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 BCAT1P54687 386 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 BMPR2Q13873 1038 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 SYCP2LQ5T4T6 812 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 LGSNQ5TDP6 509 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 DARS2Q6PI48 645 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 ZCCHC23Q6ZST2 131 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 DENND5BQ6ZUT9 1274 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 ARCQ7LC44 396 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 MAP7D3Q8IWC1 876 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 ICA1LQ8NDH6 482 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 CCDC124Q96CT7 223 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 ZNF778Q96MU6 729 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 RNF157Q96PX1 679 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 PLEKHG4BQ96PX9 1271 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 PLAC1Q9HBJ0 212 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 TRPV2Q9Y5S1 764 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 DPYSL4O14531 572 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 STK10O94804 968 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 KLHL2O95198 593 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 MAP3K6O95382 1288 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 PROCP04070 461 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 CCDC166P0CW27 439 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 PRKCHP24723 683 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 FDFT1P37268 417 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 HDAC4P56524 1084 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 TLR1Q15399 786 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 PPP6R3Q5H9R7 873 aaPredicted RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 RSPH3Q86UC2 560 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 SERINC5Q86VE9 423 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 OSTM1Q86WC4 334 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 CCDC33Q8N5R6 958 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 NDRG1Q92597 394 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 SNRNP25Q9BV90 132 aaKnown RBP19.22■□□□□ 0.67
PSPC1-201ENST00000338910 MAGEB5Q9BZ81 275 aa19.22■□□□□ 0.67
PSPC1-201ENST00000338910 DENRO43583 198 aaKnown RBP19.21■□□□□ 0.67
PSPC1-201ENST00000338910 TKTP29401 623 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms