RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 KCNMA1Q12791 1236 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 AUHQ13825 339 aaKnown RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 KCNJ12Q14500 433 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 KLHDC7AQ5VTJ3 777 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 KDF1Q8NAX2 398 aaPredicted RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 MSANTD4Q8NCY6 345 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 PTPRN2Q92932 1015 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 C18orf8Q96DM3 657 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 PGAP3Q96FM1 320 aaPredicted RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 FAM129BQ96TA1 746 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 NPY6RQ99463 290 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 OMDQ99983 421 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.66■□□□□ 0.58
RAB28-202ENST00000330852 TP53BP1Q12888 1972 aaPredicted RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 SYNJ2BP-COX16A0A087WUM0 186 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 A0A1B0GVT2 93 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 MID1O15344 667 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 FLRT2O43155 660 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 LSM8O95777 96 aaKnown RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 CYP11B1P15538 503 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 PDGFRAP16234 1089 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 GALCP54803 685 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 NME3Q13232 169 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 ZNF177Q13360 481 aaPredicted RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 RAPGEF1Q13905 1077 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 CXorf57Q6NSI4 855 aaKnown RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 SND1Q7KZF4 910 aaKnown RBP eCLIP18.66■□□□□ 0.58
RAB28-202ENST00000330852 DSG4Q86SJ6 1040 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 MMAAQ8IVH4 418 aaKnown RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 OR2T34Q8NGX1 318 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 NT5C3BQ969T7 300 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 SKA1Q96BD8 255 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 TMEM121BQ9BXQ6 578 aaPredicted RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 COX16Q9P0S2 106 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 APOBEC2Q9Y235 224 aaKnown RBP18.66■□□□□ 0.58
RAB28-202ENST00000330852 ANKRD6Q9Y2G4 727 aa18.66■□□□□ 0.58
RAB28-202ENST00000330852 DOCK4Q8N1I0 1966 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 PES1O00541 588 aaKnown RBP18.65■□□□□ 0.58
RAB28-202ENST00000330852 HYAL3O43820 417 aaPredicted RBP18.65■□□□□ 0.58
RAB28-202ENST00000330852 CBFA2T3O75081 653 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 PAGE1O75459 146 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 KRT37O76014 449 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 UCHL3P15374 230 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 GOT1P17174 413 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 CXCR3P49682 368 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 CCR5P51681 352 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 RACK1P63244 317 aaKnown RBP18.65■□□□□ 0.58
RAB28-202ENST00000330852 FAM193AP78312 1265 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 TCP11X2Q5H9J9 407 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 RAB44Q7Z6P3 723 aaPredicted RBP18.65■□□□□ 0.58
RAB28-202ENST00000330852 GATA6Q92908 595 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 IGSF8Q969P0 613 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 ALG14Q96F25 216 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 RPL10LQ96L21 214 aaKnown RBP18.65■□□□□ 0.58
RAB28-202ENST00000330852 SPAG5Q96R06 1193 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 CDC6Q99741 560 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 FEM1AQ9BSK4 669 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 NAA15Q9BXJ9 866 aaKnown RBP18.65■□□□□ 0.58
RAB28-202ENST00000330852 STK33Q9BYT3 514 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 NEUROG2Q9H2A3 272 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 WDCPQ9H6R7 721 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 PLCB1Q9NQ66 1216 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 SLC25A13Q9UJS0 675 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 PCOLCE2Q9UKZ9 415 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 TBC1D30Q9Y2I9 924 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 HS3ST4Q9Y661 456 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 PLXNA2O75051 1894 aa18.65■□□□□ 0.58
RAB28-202ENST00000330852 A0A1W2PP55 124 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 A0A1W2PPC4 97 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 C1QTNF9BB2RNN3 333 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 RNASEH2AO75792 299 aaKnown RBP18.64■□□□□ 0.57
RAB28-202ENST00000330852 TOP3BO95985 862 aaKnown RBP18.64■□□□□ 0.57
RAB28-202ENST00000330852 IGHV4-34P06331 123 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 C1QTNF9P0C862 333 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 SPINK2P20155 84 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 MZF1P28698 734 aaPredicted RBP18.64■□□□□ 0.57
RAB28-202ENST00000330852 CDH4P55283 916 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 KIF19Q2TAC6 998 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 ARCQ7LC44 396 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 ERICH1Q86X53 443 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 STK40Q8N2I9 435 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 ENOX1Q8TC92 643 aaKnown RBP18.64■□□□□ 0.57
RAB28-202ENST00000330852 SETD7Q8WTS6 366 aaKnown RBP18.64■□□□□ 0.57
RAB28-202ENST00000330852 ADAMTS14Q8WXS8 1223 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 CAMK1GQ96NX5 476 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 ORAI3Q9BRQ5 295 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 KDM4CQ9H3R0 1056 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 ARHGEF38Q9NXL2 777 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 VANGL2Q9ULK5 521 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 FNDC3AQ9Y2H6 1198 aaKnown RBP18.64■□□□□ 0.57
RAB28-202ENST00000330852 DAAM1Q9Y4D1 1078 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 FHOD1Q9Y613 1164 aa18.64■□□□□ 0.57
RAB28-202ENST00000330852 C10orf142B7Z368 130 aa18.63■□□□□ 0.57
RAB28-202ENST00000330852 VILLO15195 856 aa18.63■□□□□ 0.57
RAB28-202ENST00000330852 ALOX15BO15296 676 aa18.63■□□□□ 0.57
RAB28-202ENST00000330852 ATP9BO43861 1147 aa18.63■□□□□ 0.57
RAB28-202ENST00000330852 PNMA6AP0CW24 399 aaPredicted RBP18.63■□□□□ 0.57
RAB28-202ENST00000330852 SLC25A52Q3SY17 297 aa18.63■□□□□ 0.57
RAB28-202ENST00000330852 FAM46CQ5VWP2 391 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms