RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 TGFB2P61812 414 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 CRADDP78560 199 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TMEM198Q66K66 360 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 HMBOX1Q6NT76 420 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TRNP1Q6NT89 227 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 NIPAL1Q6NVV3 410 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TANKQ92844 425 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 ASB9Q96DX5 294 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 PPP1R36Q96LQ0 422 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TRNAU1APQ9NX07 287 aaKnown RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 CCNL1Q9UK58 526 aaPredicted RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TRIM17Q9Y577 477 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 MYO18AQ92614 2054 aaKnown RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 A0A1W2PPW3 197 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TCAF2A6NFQ2 919 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TRIM64A6NGJ6 449 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TRIM64BA6NI03 449 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 APOL1O14791 398 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 PLA2G6O60733 806 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 SULT1C4O75897 302 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 LDHAP00338 332 aaKnown RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 CHRNGP07510 517 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 GSTT2P0CG29 244 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 GSTT2BP0CG30 244 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TYK2P29597 1187 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 HSPA2P54652 639 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 BCAR1P56945 870 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 ART3Q13508 389 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 ATP1A4Q13733 1029 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 CMC1Q7Z7K0 106 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 MCRS1Q96EZ8 462 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 UHRF1Q96T88 793 aaPredicted RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 CIB1Q99828 191 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TARS2Q9BW92 718 aaKnown RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 TRPV6Q9H1D0 765 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 EFCAB1Q9HAE3 211 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 ASNSD1Q9NWL6 643 aa13.05□□□□□ -0.32
CCDC60-201ENST00000327554 ZNF646O15015 1829 aaPredicted RBP13.05□□□□□ -0.32
CCDC60-201ENST00000327554 GCATO75600 419 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 CDH3P22223 829 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 ADSLP30566 484 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 MAGEA12P43365 314 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 ZNF143P52747 638 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 RHDQ02161 417 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 TRPC3Q13507 836 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 SMAD1Q15797 465 aaKnown RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 FGD3Q5JSP0 725 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 AARS2Q5JTZ9 985 aaKnown RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 SLFN12LQ6IEE8 588 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 CCDC80Q76M96 950 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 FAM160B2Q86V87 743 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 PCDH19Q8TAB3 1148 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 SYTL5Q8TDW5 730 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 TFAP2CQ92754 450 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 CDKL2Q92772 493 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 KCNN1Q92952 543 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 MOCOSQ96EN8 888 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 NPAS2Q99743 824 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 HEPHQ9BQS7 1158 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 GATA5Q9BWX5 397 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 NPLQ9BXD5 320 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 CXorf21Q9HAI6 301 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 ZBTB26Q9HCK0 441 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 SNX15Q9NRS6 342 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 PTBP2Q9UKA9 531 aaKnown RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 PCDHA10Q9Y5I2 948 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 MGAMO43451 1857 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 HDAC3O15379 428 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 GRID2O43424 1007 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 LTFP02788 710 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 ICAM1P05362 532 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 MYCLP12524 364 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 CD19P15391 556 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 DCKP27707 260 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 ASPAP45381 313 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 NAB1Q13506 487 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 PTK2BQ14289 1009 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 PGM5Q15124 567 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 C15orf59Q2T9L4 293 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 C4orf22Q6V702 233 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 ZNF420Q8TAQ5 688 aaPredicted RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 PCDHAC1Q9H158 963 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 SUCOQ9UBS9 1254 aaKnown RBP13.04□□□□□ -0.32
CCDC60-201ENST00000327554 GNPTGQ9UJJ9 305 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 SNX13Q9Y5W8 968 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 SCN9AQ15858 1988 aa13.04□□□□□ -0.32
CCDC60-201ENST00000327554 GIPC1O14908 333 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
CCDC60-201ENST00000327554 MCF2P10911 925 aa13.03□□□□□ -0.32
CCDC60-201ENST00000327554 PSMD8P48556 350 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms