RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 SREBF1P36956 1147 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 PHC1P78364 1004 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 UBE3AQ05086 875 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 GATAD2AQ86YP4 633 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 IFT43Q96FT9 208 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 CCDC106Q9BWC9 280 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 SACM1LQ9NTJ5 587 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 TBC1D22BQ9NU19 505 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 SNAP91O60641 907 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 BBOX1O75936 387 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 YAP1P46937 504 aaKnown RBP16.93■□□□□ 0.3
PACS1-201ENST00000320580 IL5RAQ01344 420 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 MRPL28Q13084 256 aaKnown RBP16.93■□□□□ 0.3
PACS1-201ENST00000320580 HNRNPDQ14103 355 aaKnown RBP16.93■□□□□ 0.3
PACS1-201ENST00000320580 MSS51Q4VC12 460 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 ADI1Q9BV57 179 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 PCDHAC1Q9H158 963 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.93■□□□□ 0.34e-6■■■■□ 22.1
PACS1-201ENST00000320580 NMRAL1Q9HBL8 299 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 MYH7P12883 1935 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 TMEM63AO94886 807 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 TGM2P21980 687 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 ITKQ08881 620 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 MMRN1Q13201 1228 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 MSLNQ13421 630 aaPredicted RBP16.93■□□□□ 0.3
PACS1-201ENST00000320580 SIX1Q15475 284 aaPredicted RBP16.93■□□□□ 0.3
PACS1-201ENST00000320580 IMPG1Q17R60 797 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 HACE1Q8IYU2 909 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 TMC2Q8TDI7 906 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 IRGQQ8WZA9 623 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 CD101Q93033 1021 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 DNAJC28Q9NX36 388 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 GIT1Q9Y2X7 761 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 ALS2Q96Q42 1657 aa16.93■□□□□ 0.3
PACS1-201ENST00000320580 RAD17O75943 681 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 CHRNA5P30532 468 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 SEZ6Q53EL9 994 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 ARMC4Q5T2S8 1044 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 DUS1LQ6P1R4 473 aaKnown RBP16.92■□□□□ 0.3
PACS1-201ENST00000320580 PAGE2Q7Z2X7 111 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 NKD2Q969F2 451 aaPredicted RBP16.92■□□□□ 0.3
PACS1-201ENST00000320580 BDH2Q9BUT1 245 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 POLR3FQ9H1D9 316 aaPredicted RBP16.92■□□□□ 0.3
PACS1-201ENST00000320580 SPAG4Q9NPE6 437 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 GABBR1Q9UBS5 961 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 SPEF1Q9Y4P9 236 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 IPPQ9Y573 584 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 INO80B-WBP1J3KQ70 363 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 POLR2EP19388 210 aaKnown RBP16.92■□□□□ 0.3
PACS1-201ENST00000320580 PLIN5Q00G26 463 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 GK3PQ14409 553 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 ANKDD1AQ495B1 522 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 C6orf10Q5SRN2 563 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 OGFRL1Q5TC84 451 aaPredicted RBP16.92■□□□□ 0.3
PACS1-201ENST00000320580 DENND1BQ6P3S1 775 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 DCDC5Q6ZRR9 648 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 INO80BQ9C086 356 aaPredicted RBP16.92■□□□□ 0.3
PACS1-201ENST00000320580 KIF17Q9P2E2 1029 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 GINS2Q9Y248 185 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 CSDE1O75534 798 aaKnown RBP16.92■□□□□ 0.3
PACS1-201ENST00000320580 MED26O95402 600 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 MYBPC1Q00872 1141 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 ORC1Q13415 861 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 FAM83EQ2M2I3 478 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 BBS12Q6ZW61 710 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 CMC1Q7Z7K0 106 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 STARD8Q92502 1023 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 VTI1BQ9UEU0 232 aa16.92■□□□□ 0.3
PACS1-201ENST00000320580 DHRS12A0PJE2 317 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 KLF11O14901 512 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 CHADO15335 359 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 ERVK-10P10266 1014 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 IFNA8P32881 189 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 GNL1P36915 607 aaPredicted RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 IL12RB1P42701 662 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 GPC3P51654 580 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 SLC7A2P52569 658 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 GDF10P55107 478 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 CHRNB3Q05901 458 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 AARS2Q5JTZ9 985 aaKnown RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 GK5Q6ZS86 529 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 SNX31Q8N9S9 440 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 APBA2Q99767 749 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 FETUBQ9UGM5 382 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 ITM2BQ9Y287 266 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 LMO7Q8WWI1 1683 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 PHRF1Q9P1Y6 1649 aaKnown RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 ARP10275 920 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 MPSTP25325 297 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 MGAT1P26572 445 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 IL12AP29459 219 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 TXNRD3Q86VQ6 643 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 ELMO2Q96JJ3 720 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 MOV10Q9HCE1 1003 aaKnown RBP16.91■□□□□ 0.3
PACS1-201ENST00000320580 TMEM221A6NGB7 291 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 AMHP03971 560 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 GPD1P21695 349 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 DCAF6Q58WW2 860 aa16.91■□□□□ 0.3
PACS1-201ENST00000320580 LRRC38Q5VT99 294 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms