RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 EIF3EP60228 445 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 NRG1Q02297 640 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 CKAP4Q07065 602 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 ZNF177Q13360 481 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 HTR4Q13639 388 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 LEXMQ3ZCV2 418 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 NOA1Q8NC60 698 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 MNS1Q8NEH6 495 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 ELSPBP1Q96BH3 223 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 TRMT61BQ9BVS5 477 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 NOL6Q9H6R4 1146 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 BRD9Q9H8M2 597 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 KCNK12Q9HB15 430 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 TRPV4Q9HBA0 871 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 HPS4Q9NQG7 708 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 CTAGE15A4D2H0 777 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 MCF2LO15068 1137 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 RAMP2O60895 175 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 LUC7L3O95232 432 aaKnown RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 CTAGE8P0CG41 777 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 RBP3P10745 1247 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 ADH5P11766 374 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 TGM2P21980 687 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 SERPINB6P35237 376 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 HCAR3P49019 387 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 MESP2Q0VG99 397 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 POLD3Q15054 466 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 TRIP13Q15645 432 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 RNF219Q5W0B1 726 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 IL31Q6EBC2 164 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 CTAGE6Q86UF2 777 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 CTAGE4Q8IX94 777 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 FAM217AQ8IXS0 508 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 CPXM2Q8N436 756 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 L2HGDHQ9H9P8 463 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 ABCB8Q9NUT2 735 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 EPS15L1Q9UBC2 864 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 ZNF212Q9UDV6 495 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 AMACRQ9UHK6 382 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 TTC7AQ9ULT0 858 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 ZNF148Q9UQR1 794 aa15.8■□□□□ 0.12
PDLIM5-202ENST00000318007 KCNK1O00180 336 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 SLC9A3R1O14745 358 aaPredicted RBP15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 CLDN11O75508 207 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 CD70P32970 193 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 CSKP41240 450 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 PAPOLAP51003 745 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 GDF10P55107 478 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 FCHO2Q0JRZ9 810 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 MTA1Q13330 715 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 NOMO1Q15155 1222 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 CXorf57Q6NSI4 855 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 DARS2Q6PI48 645 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 CCDC137Q6PK04 289 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 MTSS1LQ765P7 747 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 ARHGAP12Q8IWW6 846 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 CCDC105Q8IYK2 499 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 ATP2A3Q93084 1043 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 FAM83CQ9BQN1 747 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 ECT2Q9H8V3 914 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 TTLL3Q9Y4R7 772 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 KIF26AQ9ULI4 1882 aaPredicted RBP15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 SHROOM3Q8TF72 1996 aa15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 NYNRINQ9P2P1 1898 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-202ENST00000318007 RASA4BC9J798 803 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 CBX4O00257 560 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 RASA4O43374 803 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 LIASO43766 372 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 NARSO43776 548 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 IFNB1P01574 187 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 ETS1P14921 441 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 ZFXP17010 805 aaPredicted RBP15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 VPS41P49754 854 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 KDSRQ06136 332 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 BYSLQ13895 437 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 PAFAH1B3Q15102 231 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 ASTLQ6HA08 431 aaPredicted RBP15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 GSTA5Q7RTV2 222 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 VSIG1Q86XK7 387 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 USP33Q8TEY7 942 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 TMEM51Q9NW97 253 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 EFR3BQ9Y2G0 817 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 J3KR12 359 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 SGK1O00141 431 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 GFRA2O00451 464 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 ECI2O75521 394 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 NFATC1O95644 943 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 TCF3P15923 654 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 RBL1P28749 1068 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 HLA-FP30511 346 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 SLC6A11P48066 632 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 LMAN2Q12907 356 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 C6orf118Q5T5N4 469 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 LINGO4Q6UY18 593 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 CCDC117Q8IWD4 279 aaPredicted RBP15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 SFTPA1Q8IWL2 248 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 APCDD1Q8J025 514 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 ATPAF2Q8N5M1 289 aa15.78■□□□□ 0.12
PDLIM5-202ENST00000318007 CEP112Q8N8E3 955 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms