RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 GJB3O75712 270 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 CAVIN2O95810 425 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 F9P00740 461 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ASLP04424 464 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 EPHX1P07099 455 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SRPRAP08240 638 aaKnown RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 VAV1P15498 845 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ABCB4P21439 1286 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 GBP1P32455 592 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 RDXP35241 583 aaKnown RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 HOXD12P35452 270 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SNX16P57768 344 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 RPL7AP62424 266 aaKnown RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 BNC1Q01954 994 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SCAPQ12770 1279 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 PUM1Q14671 1186 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 ELF2Q15723 593 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 WDR59Q6PJI9 974 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SERPINA13PQ6UXR4 307 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 MCOLN2Q8IZK6 566 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 CARNMT1Q8N4J0 409 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 UCMAQ8WVF2 138 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 RXFP2Q8WXD0 754 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 NTAN1Q96AB6 310 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 SPAG5Q96R06 1193 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 EDEM3Q9BZQ6 932 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 NDFIP2Q9NV92 336 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 KIAA1522Q9P206 1035 aaPredicted RBP11.6□□□□□ -0.55
CLCC1-201ENST00000302500 HS3ST2Q9Y278 367 aa11.6□□□□□ -0.55
CLCC1-201ENST00000302500 LAMA5O15230 3695 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 SYNJ2BP-COX16A0A087WUM0 186 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 A0A0D9SEW6 157 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 A0A1W2PQJ5 194 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 GOLGA8SH3BPF8 625 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 FOXD2O60548 495 aaPredicted RBP11.59□□□□□ -0.55
CLCC1-201ENST00000302500 CLDN11O75508 207 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 FERP16591 822 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 POLR2EP19388 210 aaKnown RBP11.59□□□□□ -0.55
CLCC1-201ENST00000302500 RRM1P23921 792 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 CD6P30203 668 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 ACSL1P33121 698 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 ADRA1BP35368 520 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 DRD3P35462 400 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 METAP1P53582 386 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 CDH4P55283 916 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 RNASE9P60153 205 aaKnown RBP11.59□□□□□ -0.55
CLCC1-201ENST00000302500 IRX4P78413 519 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 FANCCQ00597 558 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 DEUP1Q05D60 604 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 CDH18Q13634 790 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 PLEKHA7Q6IQ23 1121 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 ACAD10Q6JQN1 1059 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 ERMP1Q7Z2K6 904 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 PHLDB2Q86SQ0 1253 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 FAM131BQ86XD5 332 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 DNAAF5Q86Y56 855 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 SYT12Q8IV01 421 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 CCDC185Q8N715 623 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 CADM4Q8NFZ8 388 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 TOE1Q96GM8 510 aaKnown RBP11.59□□□□□ -0.55
CLCC1-201ENST00000302500 SPACA7Q96KW9 195 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 TRIM7Q9C029 511 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 NOL6Q9H6R4 1146 aaKnown RBP11.59□□□□□ -0.55
CLCC1-201ENST00000302500 WDCPQ9H6R7 721 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 FBRSQ9HAH7 460 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 TMEM51Q9NW97 253 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 ADAM22Q9P0K1 906 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 COX16Q9P0S2 106 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 BCCIPQ9P287 314 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLCC1-201ENST00000302500 PPARGC1AQ9UBK2 798 aaKnown RBP11.59□□□□□ -0.55
CLCC1-201ENST00000302500 ADAMTS1Q9UHI8 967 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 USP18Q9UMW8 372 aa11.59□□□□□ -0.55
CLCC1-201ENST00000302500 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.58□□□□□ -0.56
CLCC1-201ENST00000302500 MED19A0JLT2 244 aaPredicted RBP11.58□□□□□ -0.56
CLCC1-201ENST00000302500 TARSL2A2RTX5 802 aaKnown RBP11.58□□□□□ -0.56
CLCC1-201ENST00000302500 E9PAM4 449 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 ZZEF1O43149 2961 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 MT-CO1P00395 513 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 GYPCP04921 128 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 IGHV4-34P06331 123 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 ATP5BP06576 529 aaKnown RBP11.58□□□□□ -0.56
CLCC1-201ENST00000302500 PDGFRAP16234 1089 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
CLCC1-201ENST00000302500 ECT2LQ008S8 904 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 RPL6Q02878 288 aaKnown RBP11.58□□□□□ -0.56
CLCC1-201ENST00000302500 CREB5Q02930 508 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 ARID5AQ03989 594 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 ZBTB16Q05516 673 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 ZNF33AQ06730 810 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 MAMLD1Q13495 774 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 STARD3Q14849 445 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 LYSMD4Q5XG99 296 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 SDE2Q6IQ49 451 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 SLC36A4Q6YBV0 504 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 LPCAT2Q7L5N7 544 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 AADATQ8N5Z0 425 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 ANKRD20A12PQ8NF67 263 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
CLCC1-201ENST00000302500 VCPIP1Q96JH7 1222 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms