RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DUX4L3P0CJ86 424 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DUX4L4P0CJ87 422 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DUX4L5P0CJ88 424 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DUX4L6P0CJ89 424 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DUX4L7P0CJ90 424 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 IL1R1P14778 569 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 CRABP2P29373 138 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 RORBQ92753 470 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 C9orf16Q9BUW7 83 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 MPP6Q9NZW5 540 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 DUX4Q9UBX2 424 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 RABGEF1Q9UJ41 708 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 MGAT4DA6NG13 374 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 CHADO15335 359 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 CRTAMO95727 393 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 CAPN1P07384 714 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 USP17L7P0C7H9 530 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 TNFSF9P41273 254 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 GRIA4P48058 902 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 BFSP2Q13515 415 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 PRMT9Q6P2P2 845 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 SETD4Q9NVD3 440 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 RIC1Q4ADV7 1423 aa15.61■□□□□ 0.09
SHROOM4-201ENST00000289292 MAGEB16A2A368 324 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 SEC22BO75396 215 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 TOMM70O94826 608 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC2A3P11169 496 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC11A2P49281 568 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 RAD23AP54725 363 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 TP53BP2Q13625 1128 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM180AQ6UWF9 173 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 LRRC39Q96DD0 335 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 TMCC3Q9ULS5 477 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 MROH1Q8NDA8 1641 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 SYNCRIPO60506 623 aaKnown RBP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 YBX3P16989 372 aaKnown RBP eCLIP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 FGD2Q7Z6J4 655 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF276Q8N554 614 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 PADI4Q9UM07 663 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 PCDHB7Q9Y5E2 793 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 AGPSO00116 658 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 BTN3A1O00481 513 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 NR2C2P49116 596 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 CNTN1Q12860 1018 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM71AQ8IYT1 594 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 SIX5Q8N196 739 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF483Q8TF39 744 aaPredicted RBP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 SYTL2Q9HCH5 934 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 A1CFQ9NQ94 594 aaKnown RBP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 PRR23AA6NEV1 266 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 BUD23O43709 281 aaKnown RBP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 POMCP01189 267 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 TUBP50607 506 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 AKT1S1Q96B36 256 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 ELOVL6Q9H5J4 265 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 IPPQ9Y573 584 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 PRR5-ARHGAP8B1AHC4 643 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 GPC1P35052 558 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 ARHGAP8P85298 464 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 TAF1CQ15572 869 aaPredicted RBP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 GNASQ5JWF2 1037 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 FBXW8Q8N3Y1 598 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 MSL3Q8N5Y2 521 aaKnown RBP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 CEP44Q9C0F1 390 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 ACTR8Q9H981 624 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 ATP6V1HQ9UI12 483 aa15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 VIRMAQ69YN4 1812 aaKnown RBP15.6■□□□□ 0.09
SHROOM4-201ENST00000289292 DNM1LO00429 736 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 F9P00740 461 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 TRAF3Q13114 568 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 STYK1Q6J9G0 422 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 FAM126BQ8IXS8 530 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 TBC1D19Q8N5T2 526 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 BPIFB6Q8NFQ5 453 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 WDR48Q8TAF3 677 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 RCN3Q96D15 328 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF112Q9UJU3 913 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 SPATA2Q9UM82 520 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 BTRCQ9Y297 605 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 A0A087WXM4 84 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 EPHA3P29320 983 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC9A5Q14940 896 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 ARHGEF6Q15052 776 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 SAMD4BQ5PRF9 694 aaKnown RBP15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 GPR107Q5VW38 600 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 DNAJB14Q8TBM8 379 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC4A5Q9BY07 1137 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 PARVBQ9HBI1 364 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 SH3BP4Q9P0V3 963 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 PSMD12O00232 456 aaPredicted RBP15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 ZNF37AP17032 561 aaPredicted RBP15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 MAPK1P28482 360 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 USP4Q13107 963 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 NBPF12Q5TAG4 269 aaPredicted RBP15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 SLC7A5P2Q9GIP4 190 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 POLG2Q9UHN1 485 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 RAD54BQ9Y620 910 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 NAGLUP54802 743 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 INAQ16352 499 aa15.59■□□□□ 0.09
SHROOM4-201ENST00000289292 DGUOKQ16854 277 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms