RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 KCTD21Q4G0X4 260 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MIIPQ5JXC2 388 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CCSAPQ6IQ19 270 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF549Q6P9A3 640 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 OR2L5Q8NG80 312 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF512BQ96KM6 892 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CYP1A1P04798 512 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 URODP06132 367 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 IDH2P48735 452 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 HKDC1Q2TB90 917 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 BRSK2Q8IWQ3 736 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 JMJD4Q9H9V9 463 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SRP68Q9UHB9 627 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 AP4E1Q9UPM8 1137 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CDHR2Q9BYE9 1310 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SLC25A12O75746 678 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SERPINF2P08697 491 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 OR56A5P0C7T3 313 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 RARGP13631 454 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 EFEMP1Q12805 493 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ACAD10Q6JQN1 1059 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF621Q6ZSS3 439 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 TRMT11Q7Z4G4 463 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CPVLQ9H3G5 476 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CBX4O00257 560 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 GATBO75879 557 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 OGNP20774 298 aaKnown RBP8.88□□□□□ -0.99
NIPBL-201ENST00000282516 KCNJ1P48048 391 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MTTPP55157 894 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CRY1Q16526 586 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 IRGCQ6NXR0 463 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 ARMCX6Q7L4S7 300 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 MIB1Q86YT6 1006 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 CCNB1IP1Q9NPC3 277 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 C8orf4Q9NR00 106 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 PSME2Q9UL46 239 aa8.88□□□□□ -0.99
NIPBL-201ENST00000282516 SAGE2PA6NJ88 616 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CYP27B1O15528 508 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CXCR2P25025 360 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 IL12AP29459 219 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 RPL4P36578 427 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CDH17Q12864 832 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 GRB14Q14449 540 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 GLRA4Q5JXX5 417 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF470Q6ECI4 717 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 FAM171BQ6P995 826 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ATCAYQ86WG3 371 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 L1RE1Q9UN81 338 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 GIT1Q9Y2X7 761 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 DHRS7Q9Y394 339 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PNPLA7Q6ZV29 1317 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 C17orf102A2RUQ5 167 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 RXRBP28702 533 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ADSSP30520 456 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 RIPK1Q13546 671 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ACOX1Q15067 660 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 NT5DC3Q86UY8 548 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TCAIMQ8N3R3 496 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PSMA8Q8TAA3 256 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 SUCOQ9UBS9 1254 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 BAIAP2Q9UQB8 552 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TDRKHQ9Y2W6 561 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ERBB3P21860 1342 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 SAMD9LQ8IVG5 1584 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 AVILO75366 819 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 MYBP10242 640 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 AP3S2P59780 193 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 EFR3AQ14156 821 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TAF1CQ15572 869 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 DENND5AQ6IQ26 1287 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ATG14Q6ZNE5 492 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 KCNMB4Q86W47 210 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ANKRD7Q92527 254 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 NELL1Q92832 810 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PANX3Q96QZ0 392 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CHP1Q99653 195 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 FAIM2Q9BWQ8 316 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PRDM8Q9NQV8 689 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ABCB10Q9NRK6 738 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ANKEF1Q9NU02 776 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TAS2R13Q9NYV9 303 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 MORF4L1Q9UBU8 362 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 IKZF3Q9UKT9 509 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 UBOX5O94941 541 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ZNF7P17097 686 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CDK7P50613 346 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ACSM2AQ08AH3 577 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TMEM62Q0P6H9 643 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 BOP1Q14137 746 aaKnown RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 CBWD6Q4V339 395 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 ACSM2BQ68CK6 577 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 UBA3Q8TBC4 463 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 PPP1R14BQ96C90 147 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 RHOBTB2Q9BYZ6 727 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 BHLHE41Q9C0J9 482 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-201ENST00000282516 LMAN2LQ9H0V9 348 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 TOR4AQ9NXH8 423 aa8.87□□□□□ -0.99
NIPBL-201ENST00000282516 OR14I1A6ND48 311 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms